Y-Net: A Spatiospectral Dual-Encoder Network for Medical Image Segmentation

Azade Farshad, Yousef Yeganeh, Peter Gehlbach, Nassir Navab

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Automated segmentation of retinal optical coherence tomography (OCT) images has become an important recent direction in machine learning for medical applications. We hypothesize that the anatomic structure of layers and their high-frequency variation in OCT images make retinal OCT a fitting choice for extracting spectral domain features and combining them with spatial domain features. In this work, we present Y-Net, an architecture that combines the frequency domain features with the image domain to improve the segmentation performance of OCT images. The results of this work demonstrate that the introduction of two branches, one for spectral and one for spatial domain features, brings very significant improvement in fluid segmentation performance and allows outperformance as compared to the well-known U-Net model. Our improvement was 13 % on the fluid segmentation dice score and 1.9 % on the average dice score. Finally, removing selected frequency ranges in the spectral domain demonstrates the impact of these features on the fluid segmentation outperformance. Code: github.com/azadef/ynet

Original languageEnglish (US)
Title of host publicationMedical Image Computing and Computer Assisted Intervention – MICCAI 2022 - 25th International Conference, Proceedings
EditorsLinwei Wang, Qi Dou, P. Thomas Fletcher, Stefanie Speidel, Shuo Li
PublisherSpringer Science and Business Media Deutschland GmbH
Pages582-592
Number of pages11
ISBN (Print)9783031164330
DOIs
StatePublished - 2022
Event25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022 - Singapore, Singapore
Duration: Sep 18 2022Sep 22 2022

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume13432 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022
Country/TerritorySingapore
CitySingapore
Period9/18/229/22/22

Keywords

  • Frequency domain in OCT
  • OCT segmentation
  • U-Net

ASJC Scopus subject areas

  • Theoretical Computer Science
  • General Computer Science

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