TY - JOUR
T1 - Undersampled MR image reconstruction using an enhanced recursive residual network
AU - Bao, Lijun
AU - Ye, Fuze
AU - Cai, Congbo
AU - Wu, Jian
AU - Zeng, Kun
AU - van Zijl, Peter C.M.
AU - Chen, Zhong
N1 - Funding Information:
This work was supported in part by National Natural Science Foundation of China under Grant 81301277, U1632274, Natural Science Foundation of Fujian Province of China 2019J01047 and National Institutes of Health NIH/NIBIB grant of USA P41EB015909.
Publisher Copyright:
© 2019 Elsevier Inc.
PY - 2019/8
Y1 - 2019/8
N2 - When using aggressive undersampling, it is difficult to recover the high quality image with reliably fine features. In this paper, we propose an enhanced recursive residual network (ERRN) that improves the basic recursive residual network with a high-frequency feature guidance, an error-correction unit and dense connections. The feature guidance is designed to predict the underlying anatomy based on image a priori learned from the label data, playing a complementary role to the residual learning. The ERRN is adapted for two important applications: compressed sensing (CS) MRI and super resolution (SR) MRI, while an application-specific error-correction unit is added into the framework, i.e. data consistency for CS-MRI and back projection for SR-MRI due to their different sampling schemes. Our proposed network was evaluated using a real-valued brain dataset, a complex-valued knee dataset, pathological brain data and in vivo rat brain data with different undersampling masks and rates. Experimental results demonstrated that ERRN presented superior reconstructions at all cases with distinctly restored structural features and highest image quality metrics compared to both the state-of-the-art convolutional neural networks and the conventional optimization-based methods, particularly for the undersampling rate over 5-fold. Thus, an excellent framework design can endow the network with a flexible architecture, fewer parameters, outstanding performances for various undersampling schemes, and reduced overfitting in generalization, which will facilitate real-time reconstruction on MRI scanners.
AB - When using aggressive undersampling, it is difficult to recover the high quality image with reliably fine features. In this paper, we propose an enhanced recursive residual network (ERRN) that improves the basic recursive residual network with a high-frequency feature guidance, an error-correction unit and dense connections. The feature guidance is designed to predict the underlying anatomy based on image a priori learned from the label data, playing a complementary role to the residual learning. The ERRN is adapted for two important applications: compressed sensing (CS) MRI and super resolution (SR) MRI, while an application-specific error-correction unit is added into the framework, i.e. data consistency for CS-MRI and back projection for SR-MRI due to their different sampling schemes. Our proposed network was evaluated using a real-valued brain dataset, a complex-valued knee dataset, pathological brain data and in vivo rat brain data with different undersampling masks and rates. Experimental results demonstrated that ERRN presented superior reconstructions at all cases with distinctly restored structural features and highest image quality metrics compared to both the state-of-the-art convolutional neural networks and the conventional optimization-based methods, particularly for the undersampling rate over 5-fold. Thus, an excellent framework design can endow the network with a flexible architecture, fewer parameters, outstanding performances for various undersampling schemes, and reduced overfitting in generalization, which will facilitate real-time reconstruction on MRI scanners.
KW - Convolutional neural network
KW - Error-correction
KW - Feature guidance
KW - Recursive residual learning
KW - Undersampled MRI reconstruction
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U2 - 10.1016/j.jmr.2019.07.020
DO - 10.1016/j.jmr.2019.07.020
M3 - Article
C2 - 31323504
AN - SCOPUS:85068936654
SN - 1090-7807
VL - 305
SP - 232
EP - 246
JO - Journal of Magnetic Resonance
JF - Journal of Magnetic Resonance
ER -