The Omicron variant of concern: Diversification and convergent evolution in spike protein, and escape from anti-Spike monoclonal antibodies

Daniele Focosi, Scott McConnell, Arturo Casadevall

Research output: Contribution to journalReview articlepeer-review

Abstract

WHO-defined SARS-CoV-2 variants of concern (VOC) drive therapeutics and vaccine development. The Omicron VOC is dominating the arena since November 2021, but the number of its sublineages is growing in complexity. Omicron represent a galaxy with a myriad of stars that suddenly rise and expand before collapsing into apparent extinction when a more fit sublineage appears. This has already happened with BA.1, BA.2, and BA.4/5 and is happening with BA.2.75. We review here the current PANGO phylogeny, focusing on sublineages with Spike mutations, and show how frequently xxxxxxxx convergent evolution has occurred in these sublineages. We finally summarize how Omicron evolution has progressively defeated the anti-Spike monoclonal antibodies authorized so far, leaving clinicians to again fall back on COVID19 convalescent plasma from vaccinated donors as the only antibody-based therapy available.

Original languageEnglish (US)
Article number100882
JournalDrug Resistance Updates
Volume65
DOIs
StatePublished - Dec 2022

Keywords

  • B.1.1.529
  • BA.1
  • BA.2
  • BA.2.12.1
  • BA.2.75
  • BA.4
  • BA.4.6
  • BA.5
  • Omicron
  • SARS-CoV-2
  • Spike
  • VOC
  • Variant of concern

ASJC Scopus subject areas

  • Infectious Diseases
  • Pharmacology (medical)
  • Oncology
  • Cancer Research
  • Pharmacology

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