Synthesis of Oligonucleotides Containing the N6-(2-Deoxy-α,β-d-erythropentofuranosyl)-2,6-diamino-4-hydroxy-5-formamidopyrimidine (Fapy⋅dG) Oxidative Damage Product Derived from 2′-Deoxyguanosine

Haozhe Yang, Joel A. Tang, Marc M. Greenberg

Research output: Contribution to journalArticlepeer-review

Abstract

N6-(2-Deoxy-α,β-d-erythropentofuranosyl)-2,6-diamino-4-hydroxy-5-formamidopyrimidine (Fapy⋅dG) is a major DNA lesion produced from 2′-deoxyguanosine under oxidizing conditions. Fapy⋅dG is produced from a common intermediate that leads to 7,8-dihydro-8-oxo-2′-deoxyguanosine (8-OxodGuo), and in greater quantities in cells. The impact of Fapy⋅dG on DNA structure and function is much less well understood than that of 8-OxodGuo. This is largely due to the significantly greater difficulty in synthesizing oligonucleotides containing Fapy⋅dG than 8-OxodGuo. We describe a synthetic approach for preparing oligonucleotides containing Fapy⋅dG that will facilitate intensive studies of this lesion in DNA. A variety of oligonucleotides as long as 30 nucleotides are synthesized. We anticipate that the chemistry described herein will provide an impetus for a wide range of studies involving Fapy⋅dG.

Original languageEnglish (US)
Pages (from-to)5441-5448
Number of pages8
JournalChemistry - A European Journal
Volume26
Issue number24
DOIs
StatePublished - Apr 24 2020
Externally publishedYes

Keywords

  • DNA damage
  • DNA oxidation
  • DNA repair
  • formamidopyrimidines
  • oligonucleotide synthesis

ASJC Scopus subject areas

  • General Chemistry
  • Catalysis
  • Organic Chemistry

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