Structural characterization of mRNA-tRNA translocation intermediates

Xabier Agirrezabala, Hstau Y. Liao, Eduard Schreiner, Jie Fu, Rodrigo F. Ortiz-Meoz, Klaus Schulten, Rachel Green, Joachim Frank

Research output: Chapter in Book/Report/Conference proceedingChapter

Abstract

Cryo-EM analysis of a wild-type Escherichia coli pretranslocational sample has revealed the presence of previously unseen intermediate substates of the bacterial ribosome during the first phase of translocation, characterized by intermediate intersubunit rotations, L1 stalk positions, and tRNA configurations. Furthermore, we describe the domain rearrangements in quantitative terms, which has allowed us to characterize the processivity and coordination of the conformational reorganization of the ribosome, along with the associated changes in tRNA ribosome-binding configuration. The results are consistent with the view of the ribosome as a molecular machine employing Brownian motion to reach a functionally productive state via a series of substates with incremental changes in conformation.

Original languageEnglish (US)
Title of host publicationNovel Developments in Cryo-EM of Biological Molecules
Subtitle of host publicationResolution in Time and State Space
PublisherTaylor and Francis
Pages87-107
Number of pages21
ISBN (Electronic)9781000989441
ISBN (Print)9789814968768
StatePublished - Oct 6 2023

ASJC Scopus subject areas

  • General Agricultural and Biological Sciences
  • General Biochemistry, Genetics and Molecular Biology

Fingerprint

Dive into the research topics of 'Structural characterization of mRNA-tRNA translocation intermediates'. Together they form a unique fingerprint.

Cite this