TY - GEN
T1 - Simultaneous segmentation and correspondence improvement using statistical modes
AU - Sinha, Ayushi
AU - Reiter, Austin
AU - Leonard, Simon
AU - Ishii, Masaru
AU - Hager, Gregory D.
AU - Taylor, Russell H.
N1 - Funding Information:
This work was funded in part by NIH R01-EB015530: Enhanced Navigation for Endoscopic Sinus Surgery through Video Analysis (PI: Hager), and in part by Johns Hopkins University internal funds.
Publisher Copyright:
© 2017 SPIE.
PY - 2017
Y1 - 2017
N2 - With the increasing amount of patient information that is being collected today, the idea of using this information to inform future patient care has gained momentum. In many cases, this information comes in the form of medical images. Several algorithms have been presented to automatically segment these images, and to extract structures relevant to different diagnostic or surgical procedures. Consequently, this allows us to obtain large data-sets of shapes, in the form of triangular meshes, segmented from these images. Given correspondences between these shapes, statistical shape models (SSMs) can be built using methods like Principal Component Analysis (PCA). Often, the initial correspondences between the shapes need to be improved, and SSMs can be used to improve these correspondences. However, just as often, initial segmentations also need to be improved. Unlike many correspondence improvement algorithms, which do not affect segmentation, many segmentation improvement algorithms negatively affect correspondences between shapes. We present a method that iteratively improves both segmentation as well as correspondence by using SSMs not only to improve correspondence, but also to constrain the movement of vertices during segmentation improvement. We show that our method is able to maintain correspondence while achieving as good or better segmentations than those produced by methods that improve segmentation without maintaining correspondence. We are additionally able to achieve segmentations with better triangle quality than segmentations produced without correspondence improvement.
AB - With the increasing amount of patient information that is being collected today, the idea of using this information to inform future patient care has gained momentum. In many cases, this information comes in the form of medical images. Several algorithms have been presented to automatically segment these images, and to extract structures relevant to different diagnostic or surgical procedures. Consequently, this allows us to obtain large data-sets of shapes, in the form of triangular meshes, segmented from these images. Given correspondences between these shapes, statistical shape models (SSMs) can be built using methods like Principal Component Analysis (PCA). Often, the initial correspondences between the shapes need to be improved, and SSMs can be used to improve these correspondences. However, just as often, initial segmentations also need to be improved. Unlike many correspondence improvement algorithms, which do not affect segmentation, many segmentation improvement algorithms negatively affect correspondences between shapes. We present a method that iteratively improves both segmentation as well as correspondence by using SSMs not only to improve correspondence, but also to constrain the movement of vertices during segmentation improvement. We show that our method is able to maintain correspondence while achieving as good or better segmentations than those produced by methods that improve segmentation without maintaining correspondence. We are additionally able to achieve segmentations with better triangle quality than segmentations produced without correspondence improvement.
KW - Correspondence improvement
KW - Segmentation improvement
KW - Statistical shape model
UR - http://www.scopus.com/inward/record.url?scp=85020260176&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85020260176&partnerID=8YFLogxK
U2 - 10.1117/12.2253533
DO - 10.1117/12.2253533
M3 - Conference contribution
AN - SCOPUS:85020260176
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2017
A2 - Angelini, Elsa D.
A2 - Styner, Martin A.
A2 - Angelini, Elsa D.
PB - SPIE
T2 - Medical Imaging 2017: Image Processing
Y2 - 12 February 2017 through 14 February 2017
ER -