TY - GEN
T1 - Robustness analysis of biochemical networks using μ-analysis and hybrid optimisation
AU - Kim, Jongrae
AU - Bates, Declan G.
AU - Postlethwaite, Ian
AU - Ma, Lan
AU - Iglesias, Pablo A.
PY - 2005/12/1
Y1 - 2005/12/1
N2 - Biological systems which have been experimentally verified to be robust to significant changes in their environments require mathematical models which are themselves robust. In this context, a necessary condition for model robustness is that the model dynamics should not be extremely sensitive to small variations in the model's parameters. Robustness analysis problems of this type have been extensively studied in the field of robust control theory, and have been found to be very difficult to solve in general. This paper describes how tools from robust control theory and nonlinear optimisation can be used to analyse the robustness of a recently proposed model of the molecular network underlying adenosine 3',5'-cyclic monophosphate (cAMP) oscillations observed in fields of chemotactic Dictyostelium discoideum cells. The network model, which consists of a system of seven coupled nonlinear differential equations, accurately reproduces the spontaneous oscillations in cAMP observed during the early development of D. discoideum. The analysis in this paper reveals, however, that very small variations in the model parameters can effectively destroy the required oscillatory dynamics.
AB - Biological systems which have been experimentally verified to be robust to significant changes in their environments require mathematical models which are themselves robust. In this context, a necessary condition for model robustness is that the model dynamics should not be extremely sensitive to small variations in the model's parameters. Robustness analysis problems of this type have been extensively studied in the field of robust control theory, and have been found to be very difficult to solve in general. This paper describes how tools from robust control theory and nonlinear optimisation can be used to analyse the robustness of a recently proposed model of the molecular network underlying adenosine 3',5'-cyclic monophosphate (cAMP) oscillations observed in fields of chemotactic Dictyostelium discoideum cells. The network model, which consists of a system of seven coupled nonlinear differential equations, accurately reproduces the spontaneous oscillations in cAMP observed during the early development of D. discoideum. The analysis in this paper reveals, however, that very small variations in the model parameters can effectively destroy the required oscillatory dynamics.
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U2 - 10.1109/CDC.2005.1583160
DO - 10.1109/CDC.2005.1583160
M3 - Conference contribution
AN - SCOPUS:33847239871
SN - 0780395689
SN - 9780780395688
T3 - Proceedings of the 44th IEEE Conference on Decision and Control, and the European Control Conference, CDC-ECC '05
SP - 6234
EP - 6239
BT - Proceedings of the 44th IEEE Conference on Decision and Control, and the European Control Conference, CDC-ECC '05
T2 - 44th IEEE Conference on Decision and Control, and the European Control Conference, CDC-ECC '05
Y2 - 12 December 2005 through 15 December 2005
ER -