TY - GEN
T1 - Robust photoacoustic beamforming using dense convolutional neural networks
AU - Anas, Emran Mohammad Abu
AU - Zhang, Haichong K.
AU - Audigier, Chloé
AU - Boctor, Emad M.
N1 - Funding Information:
We would like to thank the National Institute of Health (NIH) Brain Initiative (R24MH106083-03) and NIH National Institute of Biomedical Imaging and Bioengineering (R01EB01963) for funding this project.
Funding Information:
Acknowledgements. We would like to thank the National Institute of Health (NIH) Brain Initiative (R24MH106083-03) and NIH National Institute of Biomedical Imaging and Bioengineering (R01EB01963) for funding this project.
Publisher Copyright:
© Springer Nature Switzerland AG 2018.
PY - 2018
Y1 - 2018
N2 - Photoacoustic (PA) is a promising technology for imaging of endogenous tissue chromophores and exogenous contrast agents in a wide range of clinical applications. The imaging technique is based on excitation of a tissue sample using short light pulse, followed by acquisition of the resultant acoustic signal using an ultrasound (US) transducer. To reconstruct an image of the tissue from the received US signals, the most common approach is to use the delay-and-sum (DAS) beamforming technique that assumes a wave propagation with a constant speed of sound. Unfortunately, such assumption often leads to artifacts such as sidelobes and tissue aberration; in addition, the image resolution is degraded. With an aim to improve the PA image reconstruction, in this work, we propose a deep convolutional neural networks-based beamforming approach that uses a set of densely connected convolutional layers with dilated convolution at higher layers. To train the network, we use simulated images with various sizes and contrasts of target objects, and subsequently simulating the PA effect to obtain the raw US signals at an US transducer. We test the network on an independent set of 1,500 simulated images and we achieve a mean peak-to-signal-ratio of 38.7 dB between the estimated and reference images. In addition, a comparison of our approach with the DAS beamforming technique indicates a statistical significant improvement of the proposed technique.
AB - Photoacoustic (PA) is a promising technology for imaging of endogenous tissue chromophores and exogenous contrast agents in a wide range of clinical applications. The imaging technique is based on excitation of a tissue sample using short light pulse, followed by acquisition of the resultant acoustic signal using an ultrasound (US) transducer. To reconstruct an image of the tissue from the received US signals, the most common approach is to use the delay-and-sum (DAS) beamforming technique that assumes a wave propagation with a constant speed of sound. Unfortunately, such assumption often leads to artifacts such as sidelobes and tissue aberration; in addition, the image resolution is degraded. With an aim to improve the PA image reconstruction, in this work, we propose a deep convolutional neural networks-based beamforming approach that uses a set of densely connected convolutional layers with dilated convolution at higher layers. To train the network, we use simulated images with various sizes and contrasts of target objects, and subsequently simulating the PA effect to obtain the raw US signals at an US transducer. We test the network on an independent set of 1,500 simulated images and we achieve a mean peak-to-signal-ratio of 38.7 dB between the estimated and reference images. In addition, a comparison of our approach with the DAS beamforming technique indicates a statistical significant improvement of the proposed technique.
KW - Beamforming
KW - Convolutional neural networks
KW - Delay-and-sum
KW - Dense convolution
KW - Dilated convolution
KW - Photoacoustic
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U2 - 10.1007/978-3-030-01045-4_1
DO - 10.1007/978-3-030-01045-4_1
M3 - Conference contribution
AN - SCOPUS:85054364359
SN - 9783030010447
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 3
EP - 11
BT - Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation - International Workshops, POCUS 2018, BIVPCS 2018, CuRIOUS 2018, and CPM 2018, Held in Conjunction with MICCAI 2018, Proceedings
A2 - Aylward, Stephen
A2 - Simpson, Amber
A2 - Maier-Hein, Lena
A2 - Martel, Anne
A2 - Chabanas, Matthieu
A2 - Tavares, João Manuel
A2 - Reinertsen, Ingerid
A2 - Taylor, Zeike
A2 - Xiao, Yiming
A2 - Farahani, Keyvan
A2 - Stoyanov, Danail
A2 - Li, Shuo
A2 - Rivaz, Hassan
PB - Springer Verlag
T2 - International Workshop on Point-of-Care Ultrasound, POCUS 2018, the International Workshop on Bio-Imaging and Visualization for Patient-Customized Simulations, BIVPCS 2017, the International Workshop on Correction of Brainshift with Intra-Operative Ultrasound, CuRIOUS 2018, and the International Workshop on Computational Precision Medicine, CPM 2018, held in conjunction with the 21st International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2018
Y2 - 16 September 2018 through 20 September 2018
ER -