TY - GEN
T1 - Reservoir Computing with Neural Organoids for Comparative Studies of Neurological Health
AU - Liao, Ashlee S.
AU - Din, Dowlette Mary Alam El
AU - Peranich, Preston
AU - Penn, Aliyah
AU - Sagar, Ram
AU - Mahairaki, Vasiliki
AU - Smith-Hicks, Constance
AU - Hartung, Thomas
AU - Smirnova, Lena
AU - Johnson, Erik C.
N1 - Publisher Copyright:
© 2025 IEEE.
PY - 2025
Y1 - 2025
N2 - Computational capabilities of the brain are not well understood, which makes understanding the pathophysiology of neurological disorders challenging. With advances in cell culture techniques, neural organoids can now be generated with increasing biofidelity, making them ideal for studying biological computation in both healthy and diseased states. Healthy neural organoids have already demonstrated potential to act as reservoir computers, a type of recurrent neural network for solving machine learning tasks. Therefore, a comparative analysis of the computational abilities of organoids from control subjects and subjects with SYNGAP1-related disorder was conducted. All organoids responded to electrical stimulation via a high-density microelectrode array, but SYNGAP1 organoids exhibited larger deviations from the expected interspike intervals in comparison to the delays between subsequent stimulation pulses. Despite this difference, both control and SYNGAP1 organoids performed similarly when acting as reservoirs to predict nonlinear chaotic systems (Mackey-Glass and 1D Hénon). This comparative analysis establishes a preliminary reservoir computing framework, which could be expanded towards standardizing the evaluation of in vitro/in silico combinatory models for investigating neural pathophysiology.
AB - Computational capabilities of the brain are not well understood, which makes understanding the pathophysiology of neurological disorders challenging. With advances in cell culture techniques, neural organoids can now be generated with increasing biofidelity, making them ideal for studying biological computation in both healthy and diseased states. Healthy neural organoids have already demonstrated potential to act as reservoir computers, a type of recurrent neural network for solving machine learning tasks. Therefore, a comparative analysis of the computational abilities of organoids from control subjects and subjects with SYNGAP1-related disorder was conducted. All organoids responded to electrical stimulation via a high-density microelectrode array, but SYNGAP1 organoids exhibited larger deviations from the expected interspike intervals in comparison to the delays between subsequent stimulation pulses. Despite this difference, both control and SYNGAP1 organoids performed similarly when acting as reservoirs to predict nonlinear chaotic systems (Mackey-Glass and 1D Hénon). This comparative analysis establishes a preliminary reservoir computing framework, which could be expanded towards standardizing the evaluation of in vitro/in silico combinatory models for investigating neural pathophysiology.
KW - electrical stimulation
KW - neural organoid
KW - organoid intelligence
KW - pathophysiology
KW - reservoir computing
UR - https://www.scopus.com/pages/publications/105045269057
UR - https://www.scopus.com/pages/publications/105045269057#tab=citedBy
U2 - 10.1109/NER61569.2025.11589046
DO - 10.1109/NER61569.2025.11589046
M3 - Conference contribution
AN - SCOPUS:105045269057
T3 - International IEEE/EMBS Conference on Neural Engineering, NER
SP - 374
EP - 379
BT - 2025 12th International IEEE/EMBS Conference on Neural Engineering, NER 2025 - Proceedings
PB - IEEE Computer Society
T2 - 12th Annual International IEEE/EMBS Conference on Neural Engineering, NER 2025
Y2 - 11 November 2025 through 14 November 2025
ER -