TY - JOUR
T1 - Oxidation of 8-Oxo-7,8-dihydro-2′-deoxyguanosine Leads to Substantial DNA-Histone Cross-Links within Nucleosome Core Particles
AU - Bai, Jing
AU - Zhang, Yingqian
AU - Xi, Zhen
AU - Greenberg, Marc M.
AU - Zhou, Chuanzheng
N1 - Funding Information:
*E-mail: [email protected]. ORCID Zhen Xi: 0000-0002-3332-5413 Marc M. Greenberg: 0000-0002-5786-6118 Chuanzheng Zhou: 0000-0002-0811-7794 Funding This work was supported by Natural Science Foundation of China (21572109 to C. Z., 21740002 to Z. X.), National Key R&D Program of China (2017YFA0505400 to Z. X.), Natural Science Foundation of Tianjin City (15JCYBJC53300 to C. Z.), and the National Institute of General Medical Sciences (GM-063028 to M. M. G.). C.Z. is grateful for the sponsorship from the National Thousand Young Talents Program. Notes The authors declare no competing financial interest.
Publisher Copyright:
© 2018 American Chemical Society.
PY - 2018/12/17
Y1 - 2018/12/17
N2 - 8-Oxo-7,8-dihydro-2′-deoxyguanosine(8-oxodGuo) is a common primary product of cellular oxidative DNA damage. 8-OxodGuo is more readily oxidized than 2′-deoxyguanosine (dG); a two-electron oxidation generates a highly reactive intermediate (OG ox ), which forms covalent adducts with nucleophiles, including OH - , free amines, and the side chains of amino acids such as lysine. We determined here that K 3 Fe(CN) 6 oxidation of 8-oxodGuo in nucleosome core particles (NCPs) produces high yields, quantitative (i.e., 100%) in some cases, of DNA-protein cross-links (DPCs). The efficiency of DPC formation was closely related to 8-oxodGuo base pairing and location within the NCP and was only slightly decreased by adding the DNA-protective polyamine spermine to the system. Using NCPs that contained histone mutants, we determined that DPCs result predominantly from OG ox trapping by the N-terminal histone amine. The DPCs were stable under physiological conditions and therefore could have important biological consequences. For instance, the essentially quantitative yield of DPCs at some positions within NCPs would reduce the yield of the mutagenic DNA lesions spiroiminodihydantoin and guanidinohydantoin produced from the common intermediate OG ox , which in turn would affect mutation signatures of oxidative stress in a position-dependent manner. In summary, our findings indicate that site-specific incorporation of 8-oxodGuo into NCPs, followed by its oxidation, leads to DPCs with an efficiency depending on 8-oxodGuo location and orientation. Given that 8-oxodGuo formation is widespread in genomic DNA and that DPC formation is highly efficient, DPCs may occur in eukaryotic cells and may affect several important biological processes.
AB - 8-Oxo-7,8-dihydro-2′-deoxyguanosine(8-oxodGuo) is a common primary product of cellular oxidative DNA damage. 8-OxodGuo is more readily oxidized than 2′-deoxyguanosine (dG); a two-electron oxidation generates a highly reactive intermediate (OG ox ), which forms covalent adducts with nucleophiles, including OH - , free amines, and the side chains of amino acids such as lysine. We determined here that K 3 Fe(CN) 6 oxidation of 8-oxodGuo in nucleosome core particles (NCPs) produces high yields, quantitative (i.e., 100%) in some cases, of DNA-protein cross-links (DPCs). The efficiency of DPC formation was closely related to 8-oxodGuo base pairing and location within the NCP and was only slightly decreased by adding the DNA-protective polyamine spermine to the system. Using NCPs that contained histone mutants, we determined that DPCs result predominantly from OG ox trapping by the N-terminal histone amine. The DPCs were stable under physiological conditions and therefore could have important biological consequences. For instance, the essentially quantitative yield of DPCs at some positions within NCPs would reduce the yield of the mutagenic DNA lesions spiroiminodihydantoin and guanidinohydantoin produced from the common intermediate OG ox , which in turn would affect mutation signatures of oxidative stress in a position-dependent manner. In summary, our findings indicate that site-specific incorporation of 8-oxodGuo into NCPs, followed by its oxidation, leads to DPCs with an efficiency depending on 8-oxodGuo location and orientation. Given that 8-oxodGuo formation is widespread in genomic DNA and that DPC formation is highly efficient, DPCs may occur in eukaryotic cells and may affect several important biological processes.
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U2 - 10.1021/acs.chemrestox.8b00244
DO - 10.1021/acs.chemrestox.8b00244
M3 - Article
C2 - 30412392
AN - SCOPUS:85057568665
SN - 0893-228X
VL - 31
SP - 1364
EP - 1372
JO - Chemical research in toxicology
JF - Chemical research in toxicology
IS - 12
ER -