TY - JOUR
T1 - ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI
AU - Maier, Oskar
AU - Menze, Bjoern H.
AU - von der Gablentz, Janina
AU - Häni, Levin
AU - Heinrich, Mattias P.
AU - Liebrand, Matthias
AU - Winzeck, Stefan
AU - Basit, Abdul
AU - Bentley, Paul
AU - Chen, Liang
AU - Christiaens, Daan
AU - Dutil, Francis
AU - Egger, Karl
AU - Feng, Chaolu
AU - Glocker, Ben
AU - Götz, Michael
AU - Haeck, Tom
AU - Halme, Hanna Leena
AU - Havaei, Mohammad
AU - Iftekharuddin, Khan M.
AU - Jodoin, Pierre Marc
AU - Kamnitsas, Konstantinos
AU - Kellner, Elias
AU - Korvenoja, Antti
AU - Larochelle, Hugo
AU - Ledig, Christian
AU - Lee, Jia Hong
AU - Maes, Frederik
AU - Mahmood, Qaiser
AU - Maier-Hein, Klaus H.
AU - McKinley, Richard
AU - Muschelli, John
AU - Pal, Chris
AU - Pei, Linmin
AU - Rangarajan, Janaki Raman
AU - Reza, Syed M.S.
AU - Robben, David
AU - Rueckert, Daniel
AU - Salli, Eero
AU - Suetens, Paul
AU - Wang, Ching Wei
AU - Wilms, Matthias
AU - Kirschke, Jan S.
AU - Krämer, Ulrike M.
AU - Münte, Thomas F.
AU - Schramm, Peter
AU - Wiest, Roland
AU - Handels, Heinz
AU - Reyes, Mauricio
N1 - Funding Information:
Image 9 US-Odu This work was partially supported through a grant from NCI/NIH (R15CA115464).
Funding Information:
Image 6 US-Imp2 This work was partially supported by the Imperial PhD Scholarship Programme and the Framework 7 program of the EU in the context of CENTER-TBI ( https://www.center-tbi.eu ).
Funding Information:
Image 2 US-Imp1 This work was supported by NIHR Grant i4i: Decision-assist software for management of acute ischaemic stroke using brain-imaging machine-learning (Ref: II-LA-0814-20007).
Funding Information:
Image 15 BE-Kul2 This work was financially supported by the KU Leuven Concerted Research Action GOA/11/006. David Robben is supported by a Ph.D. fellowship of the Research Foundation - Flanders (FWO). Daan Christiaens is supported by Ph.D. grant SB 121013 of the Agency for Innovation by Science and Technology (IWT). Janaki Raman Rangarajan is supported by IWT SBO project MIRIAD (Molecular Imaging Research Initiative for Application in Drug Development, SBO-130065).
Funding Information:
Image 13 CA-USher This work was supported by NSERC Discovery Grant 371951.
Funding Information:
Image 10 NW-Ntust This work was supported by the Ministry of Science and Technology of Taiwan under the Grant (MOST104-2221-E-011-085).
Funding Information:
Image 11 CN-Neu This work was supported by the Fundamental Research Funds for the Central Universities of China under grant N140403006 and the Postdoctoral Scientific Research Funds of Northeastern University under grant No. 20150310 .
Funding Information:
Image 7 US-Jhu This work was funded by the Epidemiology and Biostatistics training grant from the NIH (T32AG021334).
Publisher Copyright:
© 2016
PY - 2017/1/1
Y1 - 2017/1/1
N2 - Ischemic stroke is the most common cerebrovascular disease, and its diagnosis, treatment, and study relies on non-invasive imaging. Algorithms for stroke lesion segmentation from magnetic resonance imaging (MRI) volumes are intensely researched, but the reported results are largely incomparable due to different datasets and evaluation schemes. We approached this urgent problem of comparability with the Ischemic Stroke Lesion Segmentation (ISLES) challenge organized in conjunction with the MICCAI 2015 conference. In this paper we propose a common evaluation framework, describe the publicly available datasets, and present the results of the two sub-challenges: Sub-Acute Stroke Lesion Segmentation (SISS) and Stroke Perfusion Estimation (SPES). A total of 16 research groups participated with a wide range of state-of-the-art automatic segmentation algorithms. A thorough analysis of the obtained data enables a critical evaluation of the current state-of-the-art, recommendations for further developments, and the identification of remaining challenges. The segmentation of acute perfusion lesions addressed in SPES was found to be feasible. However, algorithms applied to sub-acute lesion segmentation in SISS still lack accuracy. Overall, no algorithmic characteristic of any method was found to perform superior to the others. Instead, the characteristics of stroke lesion appearances, their evolution, and the observed challenges should be studied in detail. The annotated ISLES image datasets continue to be publicly available through an online evaluation system to serve as an ongoing benchmarking resource (www.isles-challenge.org).
AB - Ischemic stroke is the most common cerebrovascular disease, and its diagnosis, treatment, and study relies on non-invasive imaging. Algorithms for stroke lesion segmentation from magnetic resonance imaging (MRI) volumes are intensely researched, but the reported results are largely incomparable due to different datasets and evaluation schemes. We approached this urgent problem of comparability with the Ischemic Stroke Lesion Segmentation (ISLES) challenge organized in conjunction with the MICCAI 2015 conference. In this paper we propose a common evaluation framework, describe the publicly available datasets, and present the results of the two sub-challenges: Sub-Acute Stroke Lesion Segmentation (SISS) and Stroke Perfusion Estimation (SPES). A total of 16 research groups participated with a wide range of state-of-the-art automatic segmentation algorithms. A thorough analysis of the obtained data enables a critical evaluation of the current state-of-the-art, recommendations for further developments, and the identification of remaining challenges. The segmentation of acute perfusion lesions addressed in SPES was found to be feasible. However, algorithms applied to sub-acute lesion segmentation in SISS still lack accuracy. Overall, no algorithmic characteristic of any method was found to perform superior to the others. Instead, the characteristics of stroke lesion appearances, their evolution, and the observed challenges should be studied in detail. The annotated ISLES image datasets continue to be publicly available through an online evaluation system to serve as an ongoing benchmarking resource (www.isles-challenge.org).
KW - Benchmark
KW - Challenge
KW - Comparison
KW - Ischemic stroke
KW - MRI
KW - Segmentation
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U2 - 10.1016/j.media.2016.07.009
DO - 10.1016/j.media.2016.07.009
M3 - Article
C2 - 27475911
AN - SCOPUS:84979950799
SN - 1361-8415
VL - 35
SP - 250
EP - 269
JO - Medical image analysis
JF - Medical image analysis
ER -