TY - JOUR
T1 - HIV-1 sequence data coverage in Central East Africa from 1959 to 2013
AU - Lamers, Susanna L.
AU - Barbier, Andrew E.
AU - Ratmann, Oliver
AU - Fraser, Christophe
AU - Rose, Rebecca
AU - Laeyendecker, Oliver
AU - Grabowski, Mary K.
N1 - Publisher Copyright:
© Mary Ann Liebert, Inc. 2016.
PY - 2016/9/1
Y1 - 2016/9/1
N2 - Central and Eastern African HIV sequence data have been most critical in understanding the establishment and evolution of the global HIV pandemic. Here we report on the extent of publicly available HIV genetic sequence data in the Los Alamos National Laboratory Sequence Database sampled from 1959 to 2013 from six African countries: Uganda, Kenya, Tanzania, Burundi, the Democratic Republic of Congo, and Rwanda. We have summarized these data, including HIV subtypes, the years sampled, and the genomic regions sequenced. We also provide curated alignments for this important geographic area in five HIV genomic regions with substantial coverage.
AB - Central and Eastern African HIV sequence data have been most critical in understanding the establishment and evolution of the global HIV pandemic. Here we report on the extent of publicly available HIV genetic sequence data in the Los Alamos National Laboratory Sequence Database sampled from 1959 to 2013 from six African countries: Uganda, Kenya, Tanzania, Burundi, the Democratic Republic of Congo, and Rwanda. We have summarized these data, including HIV subtypes, the years sampled, and the genomic regions sequenced. We also provide curated alignments for this important geographic area in five HIV genomic regions with substantial coverage.
UR - http://www.scopus.com/inward/record.url?scp=84984999030&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84984999030&partnerID=8YFLogxK
U2 - 10.1089/aid.2016.0079
DO - 10.1089/aid.2016.0079
M3 - Article
C2 - 27353049
AN - SCOPUS:84984999030
SN - 0889-2229
VL - 32
SP - 904
EP - 908
JO - AIDS Research and Human Retroviruses
JF - AIDS Research and Human Retroviruses
IS - 9
ER -