TY - JOUR
T1 - From bench to bedside
T2 - Single-cell analysis for cancer immunotherapy
AU - Davis-Marcisak, Emily F.
AU - Deshpande, Atul
AU - Stein-O'Brien, Genevieve L.
AU - Ho, Won J.
AU - Laheru, Daniel
AU - Jaffee, Elizabeth M.
AU - Fertig, Elana J.
AU - Kagohara, Luciane T.
N1 - Publisher Copyright:
© 2021 Elsevier Inc.
PY - 2021/8/9
Y1 - 2021/8/9
N2 - Single-cell technologies are emerging as powerful tools for cancer research. These technologies characterize the molecular state of each cell within a tumor, enabling new exploration of tumor heterogeneity, microenvironment cell-type composition, and cell state transitions that affect therapeutic response, particularly in the context of immunotherapy. Analyzing clinical samples has great promise for precision medicine but is technically challenging. Successfully identifying predictors of response requires well-coordinated, multi-disciplinary teams to ensure adequate sample processing for high-quality data generation and computational analysis for data interpretation. Here, we review current approaches to sample processing and computational analysis regarding their application to translational cancer immunotherapy research.
AB - Single-cell technologies are emerging as powerful tools for cancer research. These technologies characterize the molecular state of each cell within a tumor, enabling new exploration of tumor heterogeneity, microenvironment cell-type composition, and cell state transitions that affect therapeutic response, particularly in the context of immunotherapy. Analyzing clinical samples has great promise for precision medicine but is technically challenging. Successfully identifying predictors of response requires well-coordinated, multi-disciplinary teams to ensure adequate sample processing for high-quality data generation and computational analysis for data interpretation. Here, we review current approaches to sample processing and computational analysis regarding their application to translational cancer immunotherapy research.
KW - computational biology
KW - single-cell proteomics
KW - single-cell transcriptomics
KW - spatial proteomics
KW - spatial transcriptomics
KW - translational medicine
KW - tumor immunology
UR - http://www.scopus.com/inward/record.url?scp=85111883273&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85111883273&partnerID=8YFLogxK
U2 - 10.1016/j.ccell.2021.07.004
DO - 10.1016/j.ccell.2021.07.004
M3 - Review article
C2 - 34329587
AN - SCOPUS:85111883273
SN - 1535-6108
VL - 39
SP - 1062
EP - 1080
JO - Cancer cell
JF - Cancer cell
IS - 8
ER -