Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease

Joel T. Dudley, Marina Sirota, Mohan Shenoy, Reetesh K. Pai, Silke Roedder, Annie P. Chiang, Alex A. Morgan, Minnie M. Sarwal, Pankaj Jay Pasricha, Atul J. Butte

Research output: Contribution to journalArticlepeer-review

368 Scopus citations


Inflammatory bowel disease (IBD) is a chronic inflammatory disorder of the gastrointestinal tract for which there are few safe AND effective therapeutic options for long-term treatment and disease maintenance. Here, we applied a computational approach to discover new Drug therapies for IBD in silico, using publicly available molecular data reporting gene expression in IBD samples and 164 small-molecule drug compounds. Among the top compounds predicted to be therapeutic for IBD by our approach were prednisolone, a corticosteroid used to treat IBD, and topiramate, an anticonvulsant drug not previously described to have efficacy for IBD or any related disorders of inflammation or the gastrointestinal tract. Using a trinitrobenzenesulfonic acid (TNBS)-induced rodent model of IBD, we experimentally validated our topiramate prediction in vivo. Oral administration of topiramate significantly reduced gross pathological signs and microscopic damage in primary affected colon tissue in the TNBS-induced rodent model of IBD. These findings suggest that topiramate might serve as a therapeutic option for IBD in humans and support the use of public molecular data and computational approaches to discover new therapeutic options for disease.

Original languageEnglish (US)
Article number96ra76
JournalScience translational medicine
Issue number96
StatePublished - Aug 17 2011
Externally publishedYes

ASJC Scopus subject areas

  • Medicine(all)


Dive into the research topics of 'Computational repositioning of the anticonvulsant topiramate for inflammatory bowel disease'. Together they form a unique fingerprint.

Cite this