Catalytic role of the amino-terminal proline in 4-oxalocrotonate tautomerase: Affinity labeling and heteronuclear NMR studies

James T. Stivers, Chitrananda Abeygunawardana, Albert S. Mildvan, Gholamhossein Hajipour, Christian P. Whitman, Lorenzo H. Chen

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4-Oxalocrotonate tautomerase (EC 5.3.2-; 4-OT), a hexamer consisting of 62 residues per subunit, catalyzes the isomerization of unsaturated α-keto acids, converting unconjugated ketones to the conjugated isomers via a dienolic intermediate. The recently solved crystal structure of an isozyme of 4-OT suggests that the amino-terminal proline is the catalytic base [Subramanya, H. S., Roper, D. I., Dauter, Z., Dodson, E. J., Davies, G. J., Wilson, K. S., and Wigley, D. B. (1996) Biochemistry 35, 792802]. In support of this proposed role, we have found that the active-site-directed irreversible inhibitor 3-bromopyruvate (3-BP) blocks the amino terminus of 4- OT to Edman degradation and results in the disappearance of the 15N resonance of Pro-I (δ = 49.2 ppm at pH 6.40 and 42°C) in the 15N NMR spectrum of uniformly 15N-labeled 4-OT. Furthermore, covalent bonding between a 15N resonance of 4-OT and the methylene carbon of the reduced, 3- 13C-labeled lactyl adduct derived from [3-13C]bromopyruvate was then directly demonstrated using two heteronuclear NMR methods, an 1H-13C HSQC experiment and a novel inverse correlation experiment which we call H(C)N. The chemical shift of the modified 15N resonance (δ = 86.5 ppm) is consistent with that of an alkylated and cationic, aminoterminal proline. Affinity labeling with 2-14C-labeled bromopyruvate indicates that the ultimate stoichiometry of modification is 1 equiv of 3-BP per 4-OT monomer. However, an analysis of the residual enzyme activity after differing extents of fractional modification with 3-BP indicates that modification of three active sites per hexamer abolishes essentially all activity of the hexamer. Thus, 4-OT exhibits half-of-the-sites stoichiometry with 3-BP. Finally, the pH dependence of k(inact)/K1 for affinity labeling by 3-BP yields a pK(a) value of 6.7 ± 0.3, in reasonable agreement with the pK(a) values found for k(cat)/K(M) for the non-sticky substrate 2-hydroxy-2,4-pentadienoate and by direct NMR titration of Pro-I [Stivers, J. T., Abeygunawardana, C., Mildvan, A. S., Hajipour, G., and Whitman, C. P. (1996) Biochemistry 35, 814-823]. These results strongly implicate the amino-terminal proline as the general- base catalyst on 4-OT.

Original languageEnglish (US)
Pages (from-to)803-813
Number of pages11
Issue number3
StatePublished - Jan 23 1996

ASJC Scopus subject areas

  • Biochemistry


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