TY - JOUR
T1 - Breast lesion classification based on dynamic contrast-enhanced magnetic resonance images sequences with long short-term memory networks
AU - Antropova, Natalia
AU - Huynh, Benjamin
AU - Li, Hui
AU - Giger, Maryellen L.
N1 - Publisher Copyright:
© 2018 Society of Photo-Optical Instrumentation Engineers (SPIE).
PY - 2018/1/1
Y1 - 2018/1/1
N2 - We present a breast lesion classification methodology, based on four-dimensional (4-D) dynamic contrast-enhanced magnetic resonance images (DCE-MRI), using recurrent neural networks in combination with a pretrained convolutional neural network (CNN). The method enables to capture not only the two-dimensional image features but also the temporal enhancement patterns presented in DCE-MRI. We train a long short-term memory (LSTM) network on temporal sequences of feature vectors extracted from the dynamic MRI sequences. To capture the local changes in lesion enhancement, the feature vectors are obtained from various levels of a pretrained CNN. We compare the LSTM method's performance to that of a CNN fine-tuned on "RGB" MRIs, formed by precontrast, first, and second postcontrast MRIs. LSTM significantly outperformed the fine-tuned CNN, resulting in AUCLSTM = 0.88 and AUCfine-tuned = 0.84, p = 0.00085, in the task of distinguishing benign and malignant lesions. Our method captures clinically useful information carried by the full 4-D dynamic MRI sequence and outperforms the standard fine-tuning method.
AB - We present a breast lesion classification methodology, based on four-dimensional (4-D) dynamic contrast-enhanced magnetic resonance images (DCE-MRI), using recurrent neural networks in combination with a pretrained convolutional neural network (CNN). The method enables to capture not only the two-dimensional image features but also the temporal enhancement patterns presented in DCE-MRI. We train a long short-term memory (LSTM) network on temporal sequences of feature vectors extracted from the dynamic MRI sequences. To capture the local changes in lesion enhancement, the feature vectors are obtained from various levels of a pretrained CNN. We compare the LSTM method's performance to that of a CNN fine-tuned on "RGB" MRIs, formed by precontrast, first, and second postcontrast MRIs. LSTM significantly outperformed the fine-tuned CNN, resulting in AUCLSTM = 0.88 and AUCfine-tuned = 0.84, p = 0.00085, in the task of distinguishing benign and malignant lesions. Our method captures clinically useful information carried by the full 4-D dynamic MRI sequence and outperforms the standard fine-tuning method.
KW - breast cancer
KW - convolutional neural networks
KW - dynamic contrast-enhanced magnetic resonance imaging
KW - four-dimensional data
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U2 - 10.1117/1.JMI.6.1.011002
DO - 10.1117/1.JMI.6.1.011002
M3 - Article
AN - SCOPUS:85052967971
SN - 2329-4302
VL - 6
JO - Journal of Medical Imaging
JF - Journal of Medical Imaging
IS - 1
M1 - 011002
ER -