BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes

Thomas L. Athey; Matthew A. Wright; Marija Pavlovic; Vikram Chandrashekhar; Karl Deisseroth; Michael I. Miller; Joshua T. Vogelstein

doi:10.1007/s12021-023-09638-2

BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes

Thomas L. Athey, Matthew A. Wright, Marija Pavlovic, Vikram Chandrashekhar, Karl Deisseroth, Michael I. Miller, Joshua T. Vogelstein

Whiting School of Engineering

Research output: Contribution to journal › Comment/debate › peer-review

Original language	English (US)
Pages (from-to)	637-639
Number of pages	3
Journal	Neuroinformatics
Volume	21
Issue number	4
DOIs	https://doi.org/10.1007/s12021-023-09638-2
State	Published - Oct 2023

ASJC Scopus subject areas

Software
Information Systems
General Neuroscience

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10.1007/s12021-023-09638-2

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@article{4780e56c52b04213b86526f24257e37d,

title = "BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes",

author = "Athey, {Thomas L.} and Wright, {Matthew A.} and Marija Pavlovic and Vikram Chandrashekhar and Karl Deisseroth and Miller, {Michael I.} and Vogelstein, {Joshua T.}",

note = "Funding Information: This work is supported by NIH Grants RF1MH121539, U19AG033655, and RO1AG066184-01, NSF grants 2031985, 2014862 and the CAREER award. M.W. is supported by NIMH Grant K08MH113039. K.D. is supported by NIMH, NIDA, the NIH BRAIN Initiative, the Integrated Circuit Cracking NeuroNex Technology Hub funded by the National Science Foundation, the NOMIS Foundation, the Else Kr{\"o}ner Fresenius Foundation, the Gatsby Foundation and the AE Foundation. ",

year = "2023",

month = oct,

doi = "10.1007/s12021-023-09638-2",

language = "English (US)",

volume = "21",

pages = "637--639",

journal = "Neuroinformatics",

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T1 - BrainLine

T2 - An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes

AU - Athey, Thomas L.

AU - Wright, Matthew A.

AU - Pavlovic, Marija

AU - Chandrashekhar, Vikram

AU - Deisseroth, Karl

AU - Miller, Michael I.

AU - Vogelstein, Joshua T.

N1 - Funding Information: This work is supported by NIH Grants RF1MH121539, U19AG033655, and RO1AG066184-01, NSF grants 2031985, 2014862 and the CAREER award. M.W. is supported by NIMH Grant K08MH113039. K.D. is supported by NIMH, NIDA, the NIH BRAIN Initiative, the Integrated Circuit Cracking NeuroNex Technology Hub funded by the National Science Foundation, the NOMIS Foundation, the Else Kröner Fresenius Foundation, the Gatsby Foundation and the AE Foundation.

PY - 2023/10

Y1 - 2023/10

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U2 - 10.1007/s12021-023-09638-2

DO - 10.1007/s12021-023-09638-2

M3 - Comment/debate

C2 - 37394568

AN - SCOPUS:85164187297

SN - 1539-2791

VL - 21

SP - 637

EP - 639

JO - Neuroinformatics

JF - Neuroinformatics

IS - 4

ER -

BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes

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