ArtifactID: Identifying artifacts in low-field MRI of the brain using deep learning

Marina Manso Jimeno, Keerthi Sravan Ravi, Zhezhen Jin, Dotun Oyekunle, Godwin Ogbole, Sairam Geethanath

Research output: Contribution to journalArticlepeer-review

Abstract

Low-field MR scanners are more accessible in resource-constrained settings where skilled personnel are scarce. Images acquired in such scenarios are prone to artifacts such as wrap-around and Gibbs ringing. Such artifacts negatively affect the diagnostic quality and may be confused with pathology or reduce the region of interest visibility. As a first step solution, ArtifactID identifies wrap-around and Gibbs ringing in low-field brain MRI. We utilized two datasets: 179 T1-weighted pathological brain images from a 0.36 T scanner and 581 publicly available T1-weighted brain images. Individual binary classification models were trained to identify through-plane wrap-around, in-plane wrap-around, and Gibbs ringing. Visual explanations obtained via the GradCAM method helped develop trust in the wrap-around model. The mean precision and recall metrics across the four implemented models were 97.6% and 92.83% respectively. Agreement analysis of the models and the radiologists' labels returned Cohen's kappa values of 0.768 ± 0.062, 1.00 ± 0.000, 0.89 ± 0.085, and 0.878 ± 0.103 for the through-plane wrap-around, in-plane wrap-around, and Gibbs ringing models, respectively.

Original languageEnglish (US)
Pages (from-to)42-48
Number of pages7
JournalMagnetic Resonance Imaging
Volume89
DOIs
StatePublished - Jun 2022
Externally publishedYes

Keywords

  • Automated quality assurance
  • Explainable artificial intelligence
  • Gibbs ringing
  • Wrap-around

ASJC Scopus subject areas

  • Biophysics
  • Biomedical Engineering
  • Radiology Nuclear Medicine and imaging

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