Algorithm of regulatory signal recognition in DNA sequences

L. V. Danilova; K. Yu Gorbunov; M. S. Gelfand; V. A. Lyubetskii

doi:10.1023/A:1013282101105

Algorithm of regulatory signal recognition in DNA sequences

L. V. Danilova
, K. Yu Gorbunov
, M. S. Gelfand
, V. A. Lyubetskii

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

Abstract

An algorithm is proposed for extracting regulatory signals from DNA sequences. The algorithm complexity is nearly quadratic. The results of testing the algorithm on artificial and natural sequences are presented.

Original language	English (US)
Pages (from-to)	841-848
Number of pages	8
Journal	Molecular Biology
Volume	35
Issue number	6
DOIs	https://doi.org/10.1023/A:1013282101105
State	Published - Nov 2001
Externally published	Yes

Keywords

Computer logic
Graph algorithms
Molecular biology
Regulatory signal

ASJC Scopus subject areas

Biophysics
Structural Biology

Access to Document

10.1023/A:1013282101105

Cite this

@article{c6313a4777434f86b4cb2a0627694110,

title = "Algorithm of regulatory signal recognition in DNA sequences",

abstract = "An algorithm is proposed for extracting regulatory signals from DNA sequences. The algorithm complexity is nearly quadratic. The results of testing the algorithm on artificial and natural sequences are presented.",

keywords = "Computer logic, Graph algorithms, Molecular biology, Regulatory signal",

author = "Danilova, \{L. V.\} and Gorbunov, \{K. Yu\} and Gelfand, \{M. S.\} and Lyubetskii, \{V. A.\}",

note = "Funding Information: ACKNOWLEDGMENTS We thank A.A. Mironov for the help with GenomeExplorer and valuable discussion. This work was supported in part by Merck Genome Research Institute (project no. 244), INTAS (project no. 99-1476), Russian Foundation for Basic Research (projects nos. 99-04-48247 and 00-15-99362), Howard Hughes Medical Institute (project no. 55000309), and the Russian program Human Genome.",

year = "2001",

month = nov,

doi = "10.1023/A:1013282101105",

language = "English (US)",

volume = "35",

pages = "841--848",

journal = "Molecular Biology",

issn = "0026-8933",

publisher = "Pleiades Publishing",

number = "6",

}

TY - JOUR

T1 - Algorithm of regulatory signal recognition in DNA sequences

AU - Danilova, L. V.

AU - Gorbunov, K. Yu

AU - Gelfand, M. S.

AU - Lyubetskii, V. A.

N1 - Funding Information: ACKNOWLEDGMENTS We thank A.A. Mironov for the help with GenomeExplorer and valuable discussion. This work was supported in part by Merck Genome Research Institute (project no. 244), INTAS (project no. 99-1476), Russian Foundation for Basic Research (projects nos. 99-04-48247 and 00-15-99362), Howard Hughes Medical Institute (project no. 55000309), and the Russian program Human Genome.

PY - 2001/11

Y1 - 2001/11

N2 - An algorithm is proposed for extracting regulatory signals from DNA sequences. The algorithm complexity is nearly quadratic. The results of testing the algorithm on artificial and natural sequences are presented.

AB - An algorithm is proposed for extracting regulatory signals from DNA sequences. The algorithm complexity is nearly quadratic. The results of testing the algorithm on artificial and natural sequences are presented.

KW - Computer logic

KW - Graph algorithms

KW - Molecular biology

KW - Regulatory signal

UR - https://www.scopus.com/pages/publications/0035497842

UR - https://www.scopus.com/pages/publications/0035497842#tab=citedBy

U2 - 10.1023/A:1013282101105

DO - 10.1023/A:1013282101105

M3 - Article

AN - SCOPUS:0035497842

SN - 0026-8933

VL - 35

SP - 841

EP - 848

JO - Molecular Biology

JF - Molecular Biology

IS - 6

ER -

Algorithm of regulatory signal recognition in DNA sequences

Abstract

Keywords

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this