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Michael Schatz

Bloomberg Distinguished Professor

20042025

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Collaborations and top research areas from the last five years

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  • Complete sequencing of ape genomes

    Yoo, D. A., Rhie, A., Hebbar, P., Antonacci, F., Logsdon, G. A., Solar, S. J., Antipov, D., Pickett, B. D., Safonova, Y., Montinaro, F., Luo, Y., Malukiewicz, J., Storer, J. M., Lin, J., Sequeira, A. N., Mangan, R. J., Hickey, G., Monfort Anez, G., Balachandran, P. & Bankevich, A. & 103 others, Beck, C. R., Biddanda, A., Borchers, M., Bouffard, G. G., Brannan, E., Brooks, S. Y., Carbone, L., Carrel, L., Chan, A. P., Crawford, J., Diekhans, M., Engelbrecht, E., Feschotte, C., Formenti, G., Garcia, G. H., de Gennaro, L., Gilbert, D., Green, R. E., Guarracino, A., Gupta, I., Haddad, D., Han, J., Harris, R. S., Hartley, G. A., Harvey, W. T., Hiller, M., Hoekzema, K., Houck, M. L., Jeong, H., Kamali, K., Kellis, M., Kille, B., Lee, C., Lee, Y., Lees, W., Lewis, A. P., Li, Q., Loftus, M., Loh, Y. H. E., Loucks, H., Ma, J., Mao, Y., Martinez, J. F. I., Masterson, P., McCoy, R. C., McGrath, B., McKinney, S., Meyer, B. S., Miga, K. H., Mohanty, S. K., Munson, K. M., Pal, K., Pennell, M., Pevzner, P. A., Porubsky, D., Potapova, T., Ringeling, F. R., Rocha, J. L., Ryder, O. A., Sacco, S., Saha, S., Sasaki, T., Schatz, M. C., Schork, N. J., Shanks, C., Smeds, L., Son, D. R., Steiner, C., Sweeten, A. P., Tassia, M. G., Thibaud-Nissen, F., Torres-González, E., Trivedi, M., Wei, W., Wertz, J., Yang, M., Zhang, P., Zhang, S., Zhang, Y., Zhang, Z., Zhao, S. A., Zhu, Y., Jarvis, E. D., Gerton, J. L., Rivas-González, I., Paten, B., Szpiech, Z. A., Huber, C. D., Lenz, T. L., Konkel, M. K., Yi, S. V., Canzar, S., Watson, C. T., Sudmant, P. H., Molloy, E., Garrison, E., Lowe, C. B., Ventura, M., O’Neill, R. J., Koren, S., Makova, K. D., Phillippy, A. M. & Eichler, E. E., May 8 2025, In: Nature. 641, 8062, p. 401-418 18 p., aae0344.

    Research output: Contribution to journal › Article › peer-review

  • Integration of transcriptomics and long-read genomics prioritizes structural variants in rare disease

    Undiagnosed Diseases Network, Apr 2025, In: Genome research. 35, 4, p. 914-928 15 p.

    Research output: Contribution to journal › Article › peer-review

  • k-mer approaches for biodiversity genomics

    Jenike, K. M., Campos-Domínguez, L., Boddé, M., Cerca, J., Hodson, C. N., Schatz, M. C. & Jaron, K. S., 2025, In: Genome research. 35, 2, p. 219-230 12 p.

    Research output: Contribution to journal › Review article › peer-review

  • Mem-based pangenome indexing for k-mer queries

    Hwang, S., Brown, N. K., Ahmed, O. Y., Jenike, K. M., Kovaka, S., Schatz, M. C. & Langmead, B., Dec 2025, In: Algorithms for Molecular Biology. 20, 1, 3.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Solanum pan-genetics reveals paralogues as contingencies in crop engineering

    Benoit, M., Jenike, K. M., Satterlee, J. W., Ramakrishnan, S., Gentile, I., Hendelman, A., Passalacqua, M. J., Suresh, H., Shohat, H., Robitaille, G. M., Fitzgerald, B., Alonge, M., Wang, X., Santos, R., He, J., Ou, S., Golan, H., Green, Y., Swartwood, K. & Karavolias, N. G. & 14 others, Sierra, G. P., Orejuela, A., Roda, F., Goodwin, S., McCombie, W. R., Kizito, E. B., Gagnon, E., Knapp, S., Särkinen, T. E., Frary, A., Gillis, J., Van Eck, J., Schatz, M. C. & Lippman, Z. B., Apr 3 2025, In: Nature. 640, 8057, p. 135-145 11 p., 320.

    Research output: Contribution to journal › Article › peer-review

    Open Access
View all 210 Research outputs