Mary Nebel

2025

Patterns of Change in Functional Connectivity and Motor Performance Are Different in Youth Recently Recovered from Concussion

Amin, N. R., Nebel, M. B., Chen, H. W., Busch, T. A., Rosenthal, E. D., Mostofsky, S., Suskauer, S. J. & Svingos, A., Jan 1 2025, In: Neurotrauma Reports. 6, 1, p. 53-67 15 p.

Research output: Contribution to journal › Article › peer-review

2024

Quantifying brain development in the HEALthy Brain and Child Development (HBCD) Study: The magnetic resonance imaging and spectroscopy protocol

Dean, D. C., Tisdall, M. D., Wisnowski, J. L., Feczko, E., Gagoski, B., Alexander, A. L., Edden, R. A. E., Gao, W., Hendrickson, T. J., Howell, B. R., Huang, H., Humphreys, K. L., Riggins, T., Sylvester, C. M., Weldon, K. B., Yacoub, E., Ahtam, B., Beck, N., Banerjee, S. & Boroday, S. & 73 others, Caprihan, A., Caron, B., Carpenter, S., Chang, Y., Chung, A. W., Cieslak, M., Clarke, W. T., Dale, A., Das, S., Davies-Jenkins, C. W., Dufford, A. J., Evans, A. C., Fesselier, L., Ganji, S. K., Gilbert, G., Graham, A. M., Gudmundson, A. T., Macgregor-Hannah, M., Harms, M. P., Hilbert, T., Hui, S. C. N., Irfanoglu, M. O., Kecskemeti, S., Kober, T., Kuperman, J. M., Lamichhane, B., Landman, B. A., Lecour-Bourcher, X., Lee, E. G., Li, X., MacIntyre, L., Madjar, C., Manhard, M. K., Mayer, A. R., Mehta, K., Moore, L. A., Murali-Manohar, S., Navarro, C., Nebel, M. B., Newman, S. D., Newton, A. T., Noeske, R., Norton, E. S., Oeltzschner, G., Ongaro-Carcy, R., Ou, X., Ouyang, M., Parrish, T. B., Pekar, J. J., Pengo, T., Pierpaoli, C., Poldrack, R. A., Rajagopalan, V., Rettmann, D. W., Rioux, P., Rosenberg, J. T., Salo, T., Satterthwaite, T. D., Scott, L. S., Shin, E., Simegn, G., Simmons, W. K., Song, Y., Tikalsky, B. J., Tkach, J., van Zijl, P. C. M., Vannest, J., Versluis, M., Zhao, Y., Zöllner, H. J., Fair, D. A., Smyser, C. D. & Elison, J. T., Dec 2024, In: Developmental Cognitive Neuroscience. 70, 101452.

Research output: Contribution to journal › Article › peer-review

Open Access

2023

A Prospective Evaluation of Infant Cerebellar-Cerebral Functional Connectivity in Relation to Behavioral Development in Autism Spectrum Disorder

IBIS Network, Jan 2023, In: Biological Psychiatry Global Open Science. 3, 1, p. 149-161 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Less is more: balancing noise reduction and data retention in fMRI with data-driven scrubbing

Phạm, D., McDonald, D. J., Ding, L., Nebel, M. B. & Mejia, A. F., Apr 15 2023, In: NeuroImage. 270, 119972.

Research output: Contribution to journal › Article › peer-review

Open Access

Rethinking recovery in adolescent concussions: Network-level functional connectivity alterations associated with motor deficits

Crasta, J. E., Nebel, M. B., Svingos, A., Tucker, R. N., Chen, H. W., Busch, T., Caffo, B. S., Stephens, J. & Suskauer, S. J., Jun 1 2023, In: Human Brain Mapping. 44, 8, p. 3271-3282 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Template Independent Component Analysis with Spatial Priors for Accurate Subject-Level Brain Network Estimation and Inference

Mejia, A. F., Bolin, D., Yue, Y. R., Wang, J., Caffo, B. S. & Nebel, M. B., 2023, In: Journal of Computational and Graphical Statistics. 32, 2, p. 413-433 21 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2022

Accounting for motion in resting-state fMRI: What part of the spectrum are we characterizing in autism spectrum disorder?

Nebel, M. B., Lidstone, D. E., Wang, L., Benkeser, D., Mostofsky, S. H. & Risk, B. B., Aug 15 2022, In: NeuroImage. 257, 119296.

Research output: Contribution to journal › Article › peer-review

Open Access

Beyond Massive Univariate Tests: Covariance Regression Reveals Complex Patterns of Functional Connectivity Related to Attention-Deficit/Hyperactivity Disorder, Age, Sex, and Response Control

Zhao, Y., Nebel, M. B., Caffo, B. S., Mostofsky, S. H. & Rosch, K. S., Jan 2022, In: Biological Psychiatry Global Open Science. 2, 1, p. 8-16 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Group linear non-Gaussian component analysis with applications to neuroimaging

Zhao, Y., Matteson, D. S., Mostofsky, S. H., Nebel, M. B. & Risk, B. B., Jul 2022, In: Computational Statistics and Data Analysis. 171, 107454.

Research output: Contribution to journal › Article › peer-review

Open Access

Psilocybin induces spatially constrained alterations in thalamic functional organizaton and connectivity

Gaddis, A., Lidstone, D. E., Nebel, M. B., Griffiths, R., Mostofsky, S. H., Mejia, A. F. & Barrett, F. S., Oct 15 2022, In: NeuroImage. 260, 119434.

Research output: Contribution to journal › Article › peer-review

Open Access

2021

Aberrant prefrontal cortical–striatal functional connectivity in children with primary complex motor stereotypies

Augustine, F., Nebel, M. B., Mostofsky, S. H., Mahone, E. M. & Singer, H. S., Sep 2021, In: Cortex. 142, p. 272-282 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

A Data Driven Approach Reveals That Anomalous Motor System Connectivity is Associated With the Severity of Core Autism Symptoms

Lidstone, D. E., Rochowiak, R., Mostofsky, S. H. & Nebel, M. B., 2021, (Accepted/In press) In: Autism Research.

Research output: Contribution to journal › Article › peer-review

Altered Inferior Parietal Functional Connectivity is Correlated with Praxis and Social Skill Performance in Children with Autism Spectrum Disorder

Wymbs, N. F., Nebel, M. B., Ewen, J. B. & Mostofsky, S. H., May 1 2021, In: Cerebral Cortex. 31, 5, p. 2639-2652 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Deep sr-DDL: Deep structurally regularized dynamic dictionary learning to integrate multimodal and dynamic functional connectomics data for multidimensional clinical characterizations

D'Souza, N. S., Nebel, M. B., Crocetti, D., Robinson, J., Wymbs, N., Mostofsky, S. H. & Venkataraman, A., Nov 1 2021, In: NeuroImage. 241, 118388.

Research output: Contribution to journal › Article › peer-review

Open Access

Increased integration between default mode and task-relevant networks in children with ADHD is associated with impaired response control

Duffy, K. A., Rosch, K. S., Nebel, M. B., Seymour, K. E., Lindquist, M. A., Pekar, J. J., Mostofsky, S. H. & Cohen, J. R., Aug 2021, In: Developmental Cognitive Neuroscience. 50, 100980.

Research output: Contribution to journal › Article › peer-review

Open Access

Increased interhemispheric somatomotor functional connectivity and mirror overflow in ADHD

Chen, C., Lidstone, D., Crocetti, D., Mostofsky, S. H. & Nebel, M. B., Jan 2021, In: NeuroImage: Clinical. 31, 102759.

Research output: Contribution to journal › Article › peer-review

Open Access

Neuropsychiatric disease classification using functional connectomics - results of the connectomics in neuroimaging transfer learning challenge

Schirmer, M. D., Venkataraman, A., Rekik, I., Kim, M., Mostofsky, S. H., Nebel, M. B., Rosch, K., Seymour, K., Crocetti, D., Irzan, H., Hütel, M., Ourselin, S., Marlow, N., Melbourne, A., Levchenko, E., Zhou, S., Kunda, M., Lu, H., Dvornek, N. C. & Zhuang, J. & 6 others, Pinto, G., Samal, S., Zhang, J., Bernal-Rusiel, J. L., Pienaar, R. & Chung, A. W., May 2021, In: Medical image analysis. 70, 101972.

Research output: Contribution to journal › Article › peer-review

Open Access

Which multiband factor should you choose for your resting-state fMRI study?

Risk, B. B., Murden, R. J., Wu, J., Nebel, M. B., Venkataraman, A., Zhang, Z. & Qiu, D., Jul 1 2021, In: NeuroImage. 234, 117965.

Research output: Contribution to journal › Article › peer-review

Open Access

2020

A joint network optimization framework to predict clinical severity from resting state functional MRI data

D'Souza, N. S., Nebel, M. B., Wymbs, N., Mostofsky, S. H. & Venkataraman, A., Feb 1 2020, In: NeuroImage. 206, 116314.

Research output: Contribution to journal › Article › peer-review

Open Access

1 Scopus citations

Bridging global and local topology in whole-brain networks using the network statistic jackknife

Henry, T. R., Duffy, K. A., Rudolph, M. D., Nebel, M. B., Mostofsky, S. H. & Cohen, J. R., Feb 1 2020, In: Network Neuroscience. 4, 1, p. 70-88 19 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Template Independent Component Analysis: Targeted and Reliable Estimation of Subject-level Brain Networks Using Big Data Population Priors

Mejia, A. F., Nebel, M. B., Wang, Y., Caffo, B. S. & Guo, Y., Jul 2 2020, In: Journal of the American Statistical Association. 115, 531, p. 1151-1177 27 p.

Research output: Contribution to journal › Article › peer-review

1 Scopus citations

2019

Investigating functional brain network integrity using a traditional and novel categorical scheme for neurodevelopmental disorders

Dajani, D. R., Burrows, C. A., Odriozola, P., Baez, A., Nebel, M. B., Mostofsky, S. H. & Uddin, L. Q., Jan 1 2019, In: NeuroImage: Clinical. 21, 101678.

Research output: Contribution to journal › Article › peer-review

Open Access

12 Scopus citations

Parsing Heterogeneity in Autism Spectrum Disorder and Attention-Deficit/Hyperactivity Disorder with Individual Connectome Mapping

Dajani, D. R., Burrows, C. A., Nebel, M. B., Mostofsky, S. H., Gates, K. M. & Uddin, L. Q., Nov 2019, In: Brain connectivity. 9, 9, p. 673-691 19 p.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

2018

ADHD-related sex differences in fronto-subcortical intrinsic functional connectivity and associations with delay discounting

Rosch, K. S., Mostofsky, S. H. & Nebel, M. B., Dec 13 2018, In: Journal of Neurodevelopmental Disorders. 10, 1, 34.

Research output: Contribution to journal › Article › peer-review

Open Access

14 Scopus citations

Improved estimation of subject-level functional connectivity using full and partial correlation with empirical Bayes shrinkage

Mejia, A. F., Nebel, M. B., Barber, A. D., Choe, A. S., Pekar, J. J., Caffo, B. S. & Lindquist, M. A., May 15 2018, In: NeuroImage. 172, p. 478-491 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

7 Scopus citations

2017

Altered cerebellar connectivity in autism and cerebellar-mediated rescue of autism-related behaviors in mice

Stoodley, C. J., D'Mello, A. M., Ellegood, J., Jakkamsetti, V., Liu, P., Nebel, M. B., Gibson, J. M., Kelly, E., Meng, F., Cano, C. A., Pascual, J. M., Mostofsky, S. H., Lerch, J. P. & Tsai, P. T., Dec 1 2017, In: Nature neuroscience. 20, 12, p. 1744-1751 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

104 Scopus citations

Comparing test-retest reliability of dynamic functional connectivity methods

Choe, A. S., Nebel, M. B., Barber, A. D., Cohen, J. R., Xu, Y., Pekar, J. J., Caffo, B. & Lindquist, M. A., Sep 2017, In: NeuroImage. 158, p. 155-175 21 p.

Research output: Contribution to journal › Article › peer-review

Open Access

75 Scopus citations

Enhancing studies of the connectome in autism using the autism brain imaging data exchange II

Di Martino, A., O'Connor, D., Chen, B., Alaerts, K., Anderson, J. S., Assaf, M., Balsters, J. H., Baxter, L., Beggiato, A., Bernaerts, S., Blanken, L. M. E., Bookheimer, S. Y., Braden, B. B., Byrge, L., Castellanos, F. X., Dapretto, M., Delorme, R., Fair, D. A., Fishman, I. & Fitzgerald, J. & 19 others, Gallagher, L., Keehn, R. J. J., Kennedy, D. P., Lainhart, J. E., Luna, B., Mostofsky, S. H., Müller, R. A., Nebel, M. B., Nigg, J. T., O'Hearn, K., Solomon, M., Toro, R., Vaidya, C. J., Wenderoth, N., White, T., Craddock, R. C., Lord, C., Leventhal, B. & Milham, M. P., Mar 14 2017, In: Scientific Data. 4, 170010.

Research output: Contribution to journal › Article › peer-review

Open Access

153 Scopus citations

Novel automated morphometric and kinematic handwriting assessment: A validity study in children with ASD and ADHD

Dirlikov, B., Younes, L., Nebel, M. B., Martinelli, M. K., Tiedemann, A. N., Koch, C. A., Fiorilli, D., Bastian, A. J., Denckla, M. B., Miller, M. I. & Mostofsky, S. H., Apr 3 2017, In: Journal of Occupational Therapy, Schools, and Early Intervention. 10, 2, p. 185-201 17 p.

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Parallel group independent component analysis for massive fMRI data sets

Chen, S., Huang, L., Qiu, H., Nebel, M. B., Mostofsky, S. H., Pekar, J. J., Lindquist, M. A., Eloyan, A. & Caffo, B. S., Mar 2017, In: PloS one. 12, 3, e0173496.

Research output: Contribution to journal › Article › peer-review

Open Access

4 Scopus citations

PCA leverage: Outlier detection for high-dimensional functional magnetic resonance imaging data

Mejia, A. F., Nebel, M. B., Eloyan, A., Caffo, B. & Lindquist, M. A., Jul 1 2017, In: Biostatistics. 18, 3, p. 521-536 16 p.

Research output: Contribution to journal › Article › peer-review

5 Scopus citations

Response Inhibition Deficits and Altered Motor Network Connectivity in the Chronic Phase of Pediatric Traumatic Brain Injury

Stephens, J. A., Salorio, C. E., Gomes, J. P., Nebel, M. B., Mostofsky, S. H. & Suskauer, S. J., Nov 15 2017, In: Journal of neurotrauma. 34, 22, p. 3117-3123 7 p.

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

The impact of T1 versus EPI spatial normalization templates for fMRI data analyses

Calhoun, V. D., Wager, T. D., Krishnan, A., Rosch, K. S., Seymour, K. E., Nebel, M. B., Mostofsky, S. H., Nyalakanai, P. & Kiehl, K., Nov 2017, In: Human Brain Mapping. 38, 11, p. 5331-5342 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

76 Scopus citations

2016

Atypical lateralization of motor circuit functional connectivity in children with autism is associated with motor deficits

Floris, D. L., Barber, A. D., Nebel, M. B., Martinelli, M., Lai, M. C., Crocetti, D., Baron-Cohen, S., Suckling, J., Pekar, J. J. & Mostofsky, S. H., Jul 14 2016, In: Molecular Autism. 7, 1, 35.

Research output: Contribution to journal › Article › peer-review

Open Access

60 Scopus citations

Heterogeneity of executive functions among comorbid neurodevelopmental disorders

Dajani, D. R., Llabre, M. M., Nebel, M. B., Mostofsky, S. H. & Uddin, L. Q., Nov 9 2016, In: Scientific reports. 6, 36566.

Research output: Contribution to journal › Article › peer-review

Open Access

34 Scopus citations

Intrinsic visual-motor synchrony correlates with social deficits in autism

Nebel, M. B., Eloyan, A., Nettles, C. A., Sweeney, K. L., Ament, K., Ward, R. E., Choe, A. S., Barber, A. D., Pekar, J. J. & Mostofsky, S. H., Apr 15 2016, In: Biological psychiatry. 79, 8, p. 633-641 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

67 Scopus citations

Ready, set, go! Low anticipatory response during a dyadic task in infants at high familial risk for autism

Landa, R. J., Haworth, J. L. & Nebel, M. B., 2016, In: Frontiers in Psychology. 7, MAY, 721.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

2015

Connectivity supporting attention in children with attention deficit hyperactivity disorder

Barber, A. D., Jacobson, L. A., Wexler, J. L., Nebel, M. B., Caffo, B. S., Pekar, J. J. & Mostofsky, S. H., 2015, In: NeuroImage: Clinical. 7, p. 68-81 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

36 Scopus citations

Improving reliability of subject-level resting-state fMRI parcellation with shrinkage estimators

Mejia, A. F., Nebel, M. B., Shou, H., Crainiceanu, C. M., Pekar, J. J., Mostofsky, S., Caffo, B. & Lindquist, M. A., May 5 2015, In: NeuroImage. 112, p. 14-29 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

23 Scopus citations

Neural Correlates of Visuomotor Learning in Autism

Sharer, E., Crocetti, D., Muschelli, J., Barber, A. D., Nebel, M. B., Caffo, B. S., Pekar, J. J. & Mostofsky, S. H., Dec 1 2015, In: Journal of child neurology. 30, 14, p. 1877-1886 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

16 Scopus citations

2014

Disruption of functional organization within the primary motor cortex in children with autism

Nebel, M. B., Joel, S. E., Muschelli, J., Barber, A. D., Caffo, B. S., Pekar, J. J. & Mostofsky, S. H., Feb 2014, In: Human Brain Mapping. 35, 2, p. 567-580 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

99 Scopus citations

Evaluating dynamic bivariate correlations in resting-state fMRI: A comparison study and a new approach

Lindquist, M. A., Xu, Y., Nebel, M. B. & Caffo, B. S., Nov 1 2014, In: NeuroImage. 101, p. 531-546 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

179 Scopus citations

Health effects of lesion localization in multiple sclerosis: Spatial registration and confounding adjustment

Eloyan, A., Shou, H., Shinohara, R. T., Sweeney, E. M., Nebel, M. B., Cuzzocreo, J. L., Calabresi, P. A., Reich, D. S., Lindquist, M. A. & Crainiceanu, C. M., Sep 18 2014, In: PloS one. 9, 9, e107263.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Scopus citations

Precentral gyrus functional connectivity signatures of autism

Nebel, M. B., Eloyan, A., Barber, A. D. & Mostofsky, S. H., May 14 2014, In: Frontiers in Systems Neuroscience. 8, MAY, 80.

Research output: Contribution to journal › Article › peer-review

Open Access

42 Scopus citations

Reduction of motion-related artifacts in resting state fMRI using aCompCor

Muschelli, J., Nebel, M. B., Caffo, B. S., Barber, A. D., Pekar, J. J. & Mostofsky, S. H., Aug 1 2014, In: NeuroImage. 96, p. 22-35 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

164 Scopus citations

The autism brain imaging data exchange: Towards a large-scale evaluation of the intrinsic brain architecture in autism

Di Martino, A., Yan, C. G., Li, Q., Denio, E., Castellanos, F. X., Alaerts, K., Anderson, J. S., Assaf, M., Bookheimer, S. Y., Dapretto, M., Deen, B., Delmonte, S., Dinstein, I., Ertl-Wagner, B., Fair, D. A., Gallagher, L., Kennedy, D. P., Keown, C. L., Keysers, C. & Lainhart, J. E. & 22 others, Lord, C., Luna, B., Menon, V., Minshew, N. J., Monk, C. S., Mueller, S., Müller, R. A., Nebel, M. B., Nigg, J. T., O'Hearn, K., Pelphrey, K. A., Peltier, S. J., Rudie, J. D., Sunaert, S., Thioux, M., Tyszka, J. M., Uddin, L. Q., Verhoeven, J. S., Wenderoth, N., Wiggins, J. L., Mostofsky, S. H. & Milham, M. P., Jun 2014, In: Molecular psychiatry. 19, 6, p. 659-667 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

861 Scopus citations

2013

Quantifying the reliability of image replication studies: The image intraclass correlation coefficient (I2C2)

Shou, H., Eloyan, A., Lee, S., Zipunnikov, V., Crainiceanu, A. N., Nebel, M. B., Caffo, B., Lindquist, M. A. & Crainiceanu, C. M., Dec 2013, In: Cognitive, Affective and Behavioral Neuroscience. 13, 4, p. 714-724 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

48 Scopus citations

2012

Automated diagnoses of attention deficit hyperactive disorder using magnetic resonance imaging

Eloyan, A., Muschelli, J., Nebel, M. B., Liu, H., Han, F., Zhao, T., Barber, A., Joel, S., Pekar, J. J., Mostofsky, S. & Caffo, B., Jul 31 2012, In: Frontiers in Systems Neuroscience. JULY 2012

Research output: Contribution to journal › Article › peer-review

Open Access

47 Scopus citations

Automated diagnoses of attention deficit hyperactive disorder using magnetic resonance imaging

Eloyan, A., Muschelli, J., Nebel, M. B., Liu, H., Han, F., Zhao, T., Barber, A. D., Joel, S., Pekar, J. J., Mostofsky, S. H. & Caffo, B., Aug 30 2012, In: Frontiers in Systems Neuroscience. AUG 2012, p. 1-9 9 p.

Research output: Contribution to journal › Article › peer-review

30 Scopus citations

Perceptual and Neural Response to Affective Tactile Texture Stimulation in Adults with Autism Spectrum Disorders

Cascio, C. J., Moana-Filho, E. J., Guest, S., Nebel, M. B., Weisner, J., Baranek, G. T. & Essick, G. K., Aug 2012, In: Autism Research. 5, 4, p. 231-244 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Mary Nebel

Research output

Search results