Junyu Chen

2024

Deformable Cross-Attention Transformer for Medical Image Registration

Chen, J., Liu, Y., He, Y. & Du, Y., 2024, Machine Learning in Medical Imaging - 14th International Workshop, MLMI 2023, Held in Conjunction with MICCAI 2023, Proceedings. Cao, X., Ouyang, X., Xu, X., Rekik, I. & Cui, Z. (eds.). Springer Science and Business Media Deutschland GmbH, p. 115-125 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14348 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Girth-based administered activity for pediatric ^99mTc-DMSA SPECT

Li, Y., Brown, J. L., Xu, J., Chen, J., Ghaly, M., Dugan, M., Cao, X., Du, Y., Fahey, F. H., Bolch, W., Sgouros, G. & Frey, E. C., Feb 2024, In: Medical physics. 51, 2, p. 1019-1033 15 p.

Research output: Contribution to journal › Article › peer-review

Is Registering Raw Tagged-MR Enough for Strain Estimation in the Era of Deep Learning?

Bian, Z., Alshareef, A., Wei, S., Chen, J., Wang, Y., Woo, J., Pham, D., Zhuo, J., Carass, A. & Prince, J. L., 2024, Medical Imaging 2024: Image Processing. Colliot, O. & Mitra, J. (eds.). SPIE, 129260A. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12926).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Open Access

On Finite Difference Jacobian Computation in Deformable Image Registration

Liu, Y., Chen, J., Wei, S., Carass, A. & Prince, J., Sep 2024, In: International Journal of Computer Vision. 132, 9, p. 3678-3688 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Spach Transformer: Spatial and Channel-Wise Transformer Based on Local and Global Self-Attentions for PET Image Denoising

Jang, S. I., Pan, T., Li, Y., Heidari, P., Chen, J., Li, Q. & Gong, K., Jun 1 2024, In: IEEE transactions on medical imaging. 43, 6, p. 2036-2049 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

SwinCross: Cross-modal Swin transformer for head-and-neck tumor segmentation in PET/CT images

Li, G. Y., Chen, J., Jang, S. I., Gong, K. & Li, Q., Mar 2024, In: Medical physics. 51, 3, p. 2096-2107 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2023

MomentaMorph: Unsupervised Spatial-Temporal Registration with Momenta, Shooting, and Correction

Bian, Z., Wei, S., Liu, Y., Chen, J., Zhuo, J., Xing, F., Woo, J., Carass, A. & Prince, J. L., 2023, Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 Workshops - MTSAIL 2023, LEAF 2023, AI4Treat 2023, MMMI 2023, REMIA 2023, Held in Conjunction with MICCAI 2023, Proceedings. Woo, J., Hering, A., Silva, W., Li, X., Fu, H., Liu, X., Xing, F., Purushotham, S., Mathai, T. S., Mukherjee, P., De Grauw, M., Beets Tan, R., Corbetta, V., Kotter, E., Reyes, M., Baumgartner, C. F., Li, Q., Leahy, R., Dong, B., Chen, H., Huo, Y., Lv, J., Xu, X., Li, X., Mahapatra, D., Cheng, L., Petitjean, C. & Presles, B. (eds.). Springer Science and Business Media Deutschland GmbH, p. 24-34 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 14394 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Open Access

Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives

Li, J., Chen, J., Tang, Y., Wang, C., Landman, B. A. & Zhou, S. K., Apr 2023, In: Medical image analysis. 85, 102762.

Research output: Contribution to journal › Review article › peer-review

Open Access

2022

A Noise-Level-Aware Framework for PET Image Denoising

Li, Y., Cui, J., Chen, J., Zeng, G., Wollenweber, S., Jansen, F., Jang, S. I., Kim, K., Gong, K. & Li, Q., 2022, Machine Learning for Medical Image Reconstruction - 5th International Workshop, MLMIR 2022, Held in Conjunction with MICCAI 2022, Proceedings. Haq, N., Johnson, P., Maier, A., Qin, C., Würfl, T. & Yoo, J. (eds.). Springer Science and Business Media Deutschland GmbH, p. 75-83 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13587 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Investigation of Network Architecture for Multimodal Head-and-Neck Tumor Segmentation

Li, Y., Chen, J., Jang, S. I., Gong, K. & Li, Q., 2022, 2022 IEEE NSS/MIC RTSD - IEEE Nuclear Science Symposium, Medical Imaging Conference and Room Temperature Semiconductor Detector Conference. Institute of Electrical and Electronics Engineers Inc., (2022 IEEE NSS/MIC RTSD - IEEE Nuclear Science Symposium, Medical Imaging Conference and Room Temperature Semiconductor Detector Conference).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Open Access

TransMorph: Transformer for unsupervised medical image registration

Chen, J., Frey, E. C., He, Y., Segars, W. P., Li, Y. & Du, Y., Nov 2022, In: Medical image analysis. 82, 102615.

Research output: Contribution to journal › Article › peer-review

Open Access

Unsupervised Learning of Diffeomorphic Image Registration via TransMorph

Chen, J., Frey, E. C. & Du, Y., 2022, Biomedical Image Registration - 10th International Workshop, WBIR 2022, Proceedings. Hering, A., Schnabel, J., Zhang, M., Ferrante, E., Heinrich, M. & Rueckert, D. (eds.). Springer Science and Business Media Deutschland GmbH, p. 96-102 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13386 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2021

DeepAMO: A multi-slice, multi-view anthropomorphic model observer for visual detection tasks performed on volume images

Li, Y., Chen, J., Brown, J. L., Treves, S. T., Cao, X., Fahey, F. H., Sgouros, G., Bolch, W. E. & Frey, E. C., Jul 1 2021, In: Journal of Medical Imaging. 8, 4, 041204.

Research output: Contribution to journal › Article › peer-review

Open Access

Learning fuzzy clustering for SPECT/CT segmentation via convolutional neural networks

Chen, J., Li, Y., Luna, L. P., Chung, H. W., Rowe, S. P., Du, Y., Solnes, L. B. & Frey, E. C., Jul 2021, In: Medical physics. 48, 7, p. 3860-3877 18 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Targeted Gradient Descent: A Novel Method for Convolutional Neural Networks Fine-Tuning and Online-Learning

Chen, J., Asma, E. & Chan, C., 2021, Medical Image Computing and Computer Assisted Intervention – MICCAI 2021 - 24th International Conference, Proceedings. de Bruijne, M., Cattin, P. C., Cotin, S., Padoy, N., Speidel, S., Zheng, Y. & Essert, C. (eds.). Springer Science and Business Media Deutschland GmbH, p. 25-35 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12903 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2020

Generating anthropomorphic phantoms using fully unsupervised deformable image registration with convolutional neural networks

Chen, J., Li, Y., Du, Y. & Frey, E. C., Dec 2020, In: Medical physics. 47, 12, p. 6366-6380 15 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2 Scopus citations

2019

Incorporating CT prior information in the robust fuzzy C-means algorithm for QSPECT image segmentation

Chen, J., Jha, A. K. & Frey, E. C., 2019, Medical Imaging 2019: Image Processing. Angelini, E. D., Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). SPIE, 109491W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10949).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Scopus citations

2018

Emotion recognition with facial expressions and physiological signals

Zhong, B., Qin, Z., Yang, S., Chen, J., Mudrick, N., Taub, M., Azevedo, R. & Lobaton, E., Feb 2 2018, 2017 IEEE Symposium Series on Computational Intelligence, SSCI 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1-8 8 p. (2017 IEEE Symposium Series on Computational Intelligence, SSCI 2017 - Proceedings; vol. 2018-January).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2017

A visual saliency-based method for automatic lung regions extraction in chest radiographs

Li, X., Chen, L. & Chen, J., Oct 20 2017, 2016 13th International Computer Conference on Wavelet Active Media Technology and Information Processing, ICCWAMTIP 2017. Institute of Electrical and Electronics Engineers Inc., p. 162-165 4 p. (2016 13th International Computer Conference on Wavelet Active Media Technology and Information Processing, ICCWAMTIP 2017; vol. 2018-February).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Multi-scale cascade network for salient object detection

Li, X., Yang, F., Cheng, H., Chen, J., Guo, Y. & Chen, L., Oct 23 2017, MM 2017 - Proceedings of the 2017 ACM Multimedia Conference. Association for Computing Machinery, Inc, p. 439-447 9 p. (MM 2017 - Proceedings of the 2017 ACM Multimedia Conference).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Junyu Chen

Research output

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