Research output per year
Research output per year
- 1 - 50 out of 92 results
Search results
-
2023
Deep learning based image registration method: with application to Scanning Laser Ophthalmoscopy (SLO) longitudinal images
Wang, Y. & Yi, J., 2023, Medical Imaging 2023: Image Processing. Colliot, O. & Isgum, I. (eds.). SPIE, 124642L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12464).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Deep learning network for parallel self-denoising and segmentation in visible light optical coherence tomography of the human retina
Ye, T., Wang, J. & Yi, J., Nov 2023, In: Biomedical Optics Express. 14, 11, p. 6088-6099 12 p.Research output: Contribution to journal › Article › peer-review
Open Access -
2022
A Baseline Study of Oxygen Saturation in Parafoveal Vessels Using Visible Light Optical Coherence Tomography
Wang, J., Song, W., Sadlak, N., Fiorello, M. G., Desai, M. & Yi, J., May 12 2022, In: Frontiers in Medicine. 9, 886576.Research output: Contribution to journal › Article › peer-review
Open Access -
Mesoscopic oblique plane microscopy with a diffractive light-sheet for large-scale 4D cellular resolution imaging
Shao, W., Chang, M., Emmerich, K., Kanold, P. O., Mumm, J. S. & Yi, J., Dec 20 2022, In: Optica. 9, 12, p. 1374-1385 12 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Non-interferometric volumetric imaging in living human retina by confocal oblique scanning laser ophthalmoscopy
Shao, W. & Yi, J., Jun 1 2022, In: Biomedical Optics Express. 13, 6, p. 3576-3592 17 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Simultaneous visible light optical coherence tomography and near infrared OCT angiography in retinal pathologies: A case study
Wang, J., Baker, A., Subramanian, M. L., Siegel, N. H., Chen, X., Ness, S. & Yi, J., Mar 2022, In: Experimental Biology and Medicine. 247, 5, p. 377-384 8 p.Research output: Contribution to journal › Article › peer-review
-
Visible Light Optical Coherence Tomography of Peripapillary Retinal Nerve Fiber Layer Reflectivity in Glaucoma
Song, W., Zhang, S., Kim, Y. M., Sadlak, N., Fiorello, M. G., Desai, M. & Yi, J., Sep 2022, In: Translational Vision Science and Technology. 11, 9, 28.Research output: Contribution to journal › Article › peer-review
Open Access -
2021
A mesoscopic oblique plane microscopy (OPM) platform for centimeter scale volumetric imaging
Shao, W., Kilic, K., Yin, W., Wirak, G., Qin, X., Feng, H., Boas, D., Gabel, C. V. & Yi, J., 2021, In: Optics InfoBase Conference Papers. BM3B.1.Research output: Contribution to journal › Conference article › peer-review
-
Deep-learning augmented reflectance microscopy for label-free multiplexed cytometry
Cheng, S., Fu, S., Kim, Y. M., Song, W., Li, Y., Xue, Y., Yi, J. & Tian, L., 2021, In: Optics InfoBase Conference Papers. ATu4L.3.Research output: Contribution to journal › Conference article › peer-review
-
Deep-learning Augmented Reflectance Microscopy for Label-free Multiplexed Cytometry
Cheng, S., Fu, S., Kim, Y. M., Song, W., Li, Y., Xue, Y., Yi, J. & Tian, L., May 2021, 2021 Conference on Lasers and Electro-Optics, CLEO 2021 - Proceedings. Institute of Electrical and Electronics Engineers Inc., (2021 Conference on Lasers and Electro-Optics, CLEO 2021 - Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Deep Learning in Biomedical Optics
Tian, L., Hunt, B., Bell, M. A. L., Yi, J., Smith, J. T., Ochoa, M., Intes, X. & Durr, N. J., Aug 2021, In: Lasers in Surgery and Medicine. 53, 6, p. 748-775 28 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
High-throughput retinal oxygen mapping by phosphorescence scanning laser ophthalmoscopy
Guan, Z., Zhang, Z., Vinogradov, S. & Yi, J., 2021, In: Optics InfoBase Conference Papers. OM1E.5.Research output: Contribution to journal › Conference article › peer-review
-
Single-cell cytometry via multiplexed fluorescence prediction by label-free reflectance microscopy
Cheng, S., Fu, S., Kim, Y. M., Song, W., Li, Y., Xue, Y., Yi, J. & Tian, L., Jan 15 2021, In: Science Advances. 7, 3, eabe0431.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Wide-field and micron-resolution visible light optical coherence tomography in human retina by a linear-K spectrometer
Song, W., Shao, W. & Yi, J., 2021, In: Optics InfoBase Conference Papers. DM2A.4.Research output: Contribution to journal › Conference article › peer-review
-
Wide field-of-view volumetric imaging by a mesoscopic scanning oblique plane microscopy with switchable objective lenses
Shao, W., Kilic, K., Yin, W., Wirak, G., Qin, X., Feng, H., Boas, D., Gabel, C. V. & Yi, J., Mar 2021, In: Quantitative Imaging in Medicine and Surgery. 11, 3, p. 983-997 15 p.Research output: Contribution to journal › Article › peer-review
Open Access -
2020
Deep-learning-based computational biomedical microscopy with uncertainty quantification
Tian, L., Xue, Y., Cheng, S., Li, Y. & Ji, Y., 2020, CLEO: Applications and Technology, CLEO_AT 2020. Optica Publishing Group (formerly OSA), AW3T.1. (Optics InfoBase Conference Papers; vol. Part F181-CLEO-AT 2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Deep-Learning-Based Computational Biomedical Microscopy with Uncertainty Quantification
Tian, L., Xue, Y., Cheng, S., Li, Y. & Ji, Y., May 2020, 2020 Conference on Lasers and Electro-Optics, CLEO 2020 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 9192272. (Conference Proceedings - Lasers and Electro-Optics Society Annual Meeting-LEOS; vol. 2020-May).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Deep-learning-enabled virtual immunofluorescence staining based on reflectance microscopy
Cheng, S., Fu, S., Kim, Y. M., Yi, J. & Tian, L., Sep 2020, 2020 IEEE Photonics Conference, IPC 2020 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 9252556. (2020 IEEE Photonics Conference, IPC 2020 - Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Inverse scattering for reflection intensity phase microscopy
Matlock, A., Sentenac, A., Chaumet, P. C., Yi, J. & Tian, L., Feb 1 2020, In: Biomedical Optics Express. 11, 2, p. 911-926 16 p.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Is oblique scanning laser ophthalmoscope applicable to human ocular optics? A feasibility study using an eye model for volumetric imaging
Shao, W., Song, W. & Yi, J., Jun 1 2020, In: Journal of biophotonics. 13, 6, e201960174.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
LED array reflectance microscopy for scattering-based multi-contrast imaging
Song, W., Matlock, A., Fu, S., Qin, X., Feng, H., Gabel, C. V., Tian, L. & Yi, J., Apr 1 2020, In: Optics Letters. 45, 7, p. 1647-1650 4 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Predicting immunofluorescence images from reflectance microscopy via deep learning
Cheng, S., Fu, S., Kim, Y. M., Yi, J. & Tian, L., 2020, Microscopy Histopathology and Analytics, Microscopy 2020. Optica Publishing Group (formerly OSA), (Optics InfoBase Conference Papers; vol. Part F177-Microscopy-2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Virtual immunofluorescence staining from reflectance microscopy by deep learning
Cheng, S., Fu, S., Kim, Y. M., Yi, J. & Tian, L., Sep 14 2020, Frontiers in Optics - Proceedings Frontiers in Optics / Laser Science, Part of Frontiers in Optics + Laser Science APS/DLS, FiO 2020. Optica Publishing Group (formerly OSA), FTu2B.3. (Optics InfoBase Conference Papers).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Visible light optical coherence tomography angiography (vis-OCTA) facilitates local microvascular oximetry in the human retina
SONG, WEIYE., SHAO, WENJUN., YI, WEI., LIU, RONGRONG., DESAI, MANISHI., NESS, STEVEN. & YI, JI., Jul 1 2020, In: Biomedical Optics Express. 11, 7, p. 4037-4051 15 p.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
2019
Author Correction: Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring (Scientific Reports, (2019), 9, 1, (14148), 10.1038/s41598-019-50658-3)
Spicer, G. L. C., Eid, A., Wangpraseurt, D., Swain, T. D., Winkelmann, J. A., Yi, J., Kühl, M., Marcelino, L. A. & Backman, V., Dec 1 2019, In: Scientific reports. 9, 1, 18056.Research output: Contribution to journal › Comment/debate › peer-review
Open Access -
Deep spectral learning for label-free optical imaging oximetry with uncertainty quantification
Liu, R., Cheng, S., Tian, L. & Yi, J., Dec 1 2019, In: Light: Science and Applications. 8, 1, 102.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
Detection of malignancy in ocular surface lesions by inverse spectroscopic optical coherence tomography and two-photon autofluorescence
Lee, H. J., Zhang, L., Zhang, S. & Yi, J., May 2019, In: Translational Vision Science and Technology. 8, 3, 16.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Longitudinal detection of retinal alterations by visible and near-infrared optical coherence tomography in a dexamethasone-induced ocular hypertension mouse model
Song, W., Fu, S., Song, S., Zhang, S., Zhang, L., Ness, S., Desai, M. & Yi, J., Oct 1 2019, In: Neurophotonics. 6, 4, 041103.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring
Spicer, G. L. C., Eid, A., Wangpraseurt, D., Swain, T. D., Winkelmann, J. A., Yi, J., Kühl, M., Marcelino, L. A. & Backman, V., Dec 1 2019, In: Scientific reports. 9, 1, 14148.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Multiplexed intensity diffraction tomography (mIDT) for dynamic, label-free volumetric biological imaging
Matlock, A., Yi, J. & Tian, L., Apr 8 2019, Bio-Optics: Design and Application - Proceedings Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA, BRAIN, NTM, OMA, OMP). Optical Society of America (OSA), JW4C.2. (Bio-Optics: Design and Application - Proceedings Biophotonics Congress: Optics in the Life Sciences Congress 2019 (BODA, BRAIN, NTM, OMA, OMP)).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Quantitative quality-control metrics for in vivo oximetry in small vessels by visible light optical coherence tomography angiography
Liu, R., Song, W., Backman, V. & Yi, J., 2019, In: Biomedical Optics Express. 10, 2, p. 465-486 22 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
生物医学成像技术:可见光光学相干断层成像
Translated title of the contribution :Visible light optical coherence tomography in biomedical imaging Research output: Contribution to journal › Review article › peer-review
2 Scopus citations -
2018
Fiber-based visible and near infrared optical coherence tomography (vnOCT) enables quantitative elastic light scattering spectroscopy in human retina
Song, W., Zhou, L., Zhang, S., Ness, S., Desai, M. & Yi, J., Jul 1 2018, In: Biomedical Optics Express. 9, 7, p. 3464-3480 17 p., #326475.Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
First Born model for reflection-mode Fourier ptychographic microscopy
Matlock, A., Sentenac, A., Yi, J. & Tian, L., 2018, Mathematics in Imaging, MATH 2018. Optica Publishing Group (formerly OSA), (Optics InfoBase Conference Papers; vol. Part F105-MATH 2018).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
In vivo broadband visible light optical coherence tomography probe enables inverse spectroscopic analysis
Winkelmann, J. A., Eid, A., Nguyen, T. Q., Thang, B. U. I., Ji, Y. I. & Backman, V., Feb 1 2018, In: Optics Letters. 43, 3, p. 619-622 4 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Measurement of flow-mediated dilation of mouse femoral artery in vivo by optical coherence tomography
Song, W., Zhou, L., Kot, K. L., Fan, H., Han, J. & Yi, J., Nov 2018, In: Journal of biophotonics. 11, 11, e201800053.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Multimodal volumetric retinal imaging by oblique scanning laser ophthalmoscopy (OSLO) and optical coherence tomography (OCT)
Song, W., Zhou, L. & Yi, J., Aug 4 2018, In: Journal of Visualized Experiments. 2018, 138, e57814.Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
Oblique scanning laser ophthalmoscopy (oSLO) allows simultaneous retinal fluorescence tomography with optical coherence tomography
Zhang, L., Song, W., Shao, D., Zhang, S., Desai, M., Ness, S., Roy, S. & Yi, J., 2018, Clinical and Translational Biophotonics, TRANSLATIONAL 2018. Optica Publishing Group (formerly OSA), (Optics InfoBase Conference Papers; vol. Part F91-TRANSLATIONAL 2018).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
-
Single capillary oximetry and tissue ultrastructural sensing by dual-band dual-scan inverse spectroscopic optical coherence tomography
Liu, R., Winkelmann, J. A., Spicer, G., Zhu, Y., Eid, A., Ameer, G. A., Backman, V. & Yi, J., Dec 1 2018, In: Light: Science and Applications. 7, 1, 57.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Volumetric fluorescence retinal imaging in vivo over a 30-degree field of view by oblique scanning laser ophthalmoscopy (oSLO)
Zhang, L., Song, W., Shao, D., Zhang, S., Desai, M., Ness, S., Roy, S. & Yi, J., Jan 1 2018, In: Biomedical Optics Express. 9, 1, p. 25-40 16 p., #307165.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
2017
A Cooperative Copper Metal–Organic Framework-Hydrogel System Improves Wound Healing in Diabetes
Xiao, J., Chen, S., Yi, J., Zhang, H. F. & Ameer, G. A., Jan 5 2017, In: Advanced Functional Materials. 27, 1, 1604872.Research output: Contribution to journal › Article › peer-review
118 Scopus citations -
Increased retinal oxygen metabolism precedes microvascular alterations in type 1 diabetic mice
Liu, W., Wang, S., Soetikno, B., Yi, J., Zhang, K., Chen, S., Linsenmeier, R. A., Sorenson, C. M., Sheibani, N. & Zhang, H. F., Feb 2017, In: Investigative Ophthalmology and Visual Science. 58, 2, p. 981-989 9 p.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
Oblique scanning laser microscopy for simultaneously volumetric structural and molecular imaging using only one raster scan
Zhang, L., Capilla, A., Song, W., Mostoslavsky, G. & Yi, J., Dec 1 2017, In: Scientific reports. 7, 1, 8591.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Theoretical model for optical oximetry at the capillary level: Exploring hemoglobin oxygen saturation through backscattering of single red blood cells
Liu, R., Spicer, G., Chen, S., Zhang, H. F., Yi, J. & Backman, V., Feb 1 2017, In: Journal of biomedical optics. 22, 2, 025002.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
Wavelength-dependent optical properties of melanosomes in retinal pigmented epithelium and their changes with melanin bleaching: A numerical study
Song, W., Zhang, L., Ness, S. & Yi, J., Sep 1 2017, In: Biomedical Optics Express. 8, 9, p. 3966-3980 15 p., #295965.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
2016
Detection of extracellular matrix modification in cancer models with inverse spectroscopic optical coherence tomography
Spicer, G. L. C., Azarin, S. M., Yi, J., Young, S. T., Ellis, R., Bauer, G. M., Shea, L. D. & Backman, V., Sep 12 2016, In: Physics in medicine and biology. 61, 19, p. 6892-6904 13 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Dual-band optical coherence tomography using a single supercontinuum laser source
Chen, S., Shu, X., Yi, J., Fawzi, A. & Zhang, H. F., Jun 1 2016, In: Journal of biomedical optics. 21, 6, 066013.Research output: Contribution to journal › Article › peer-review
Open Access23 Scopus citations -
Long-term protection of retinal ganglion cells and visual function by brain-derived neurotrophic factor in mice with ocular hypertension
Feng, L., Chen, H., Yi, J., Troy, J. B., Zhang, H. F. & Liu, X., Jul 2016, In: Investigative Ophthalmology and Visual Science. 57, 8, p. 3793-3802 10 p.Research output: Contribution to journal › Article › peer-review
Open Access23 Scopus citations -
Optical detection of early damage in retinal ganglion cells in a mouse model of partial optic nerve crush injury
Yi, J., Puyang, Z., Feng, L., Duan, L., Liang, P., Backman, V., Liu, X. & Zhang, H. F., Oct 2016, In: Investigative Ophthalmology and Visual Science. 57, 13, p. 5665-5671 7 p.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Real-time Functional Analysis of Inertial Microfluidic Devices via Spectral Domain Optical Coherence Tomography
Dong, B., Chen, S., Zhou, F., Chan, C. H. Y., Yi, J., Zhang, H. F. & Sun, C., Sep 13 2016, In: Scientific reports. 6, 33250.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations